RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 JPT1Q9UK76 154 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ING4Q9UNL4 249 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ASF1AQ9Y294 204 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 ZNF256Q9Y2P7 627 aaPredicted RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 UTP11Q9Y3A2 253 aaKnown RBP2.35□□□□□ -2.03
SRP54-209ENST00000555746 TENM2Q9NT68 2774 aa2.35□□□□□ -2.03
SRP54-209ENST00000555746 MUC4Q99102 2169 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 CITO14578 2027 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 IGHV2-70DA0A0C4DH43 119 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 A0A1B0GWB2 263 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 C20orf202A1L168 122 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 OR5H14A6NHG9 310 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 FABP7O15540 132 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TCF21O43680 179 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 SYNGR1O43759 233 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 ORC5O43913 435 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TBL1XO60907 577 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 SLC22A5O76082 557 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 PTTG1O95997 202 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 HBE1P02100 147 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TACSTD2P09758 323 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 MUC1P15941 1255 aaPredicted RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 ZNF19P17023 458 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 MYL12AP19105 171 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TBPP20226 339 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TAC1P20366 129 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 VDAC1P21796 283 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 LOXP28300 417 aaPredicted RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 RPL12P30050 165 aaKnown RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 RPA3P35244 121 aaPredicted RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 GGT2P36268 569 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 HNRNPA3P51991 378 aaKnown RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 AQP5P55064 265 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 PIGPP57054 158 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TAS2R43P59537 309 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 SELENOTP62341 195 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 RHOBP62745 196 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 PPP3R1P63098 170 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TGFBR3Q03167 851 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 EMX1Q04741 257 aaPredicted RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 CD164Q04900 197 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 ST3GAL4Q11206 333 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 PMVKQ15126 192 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 CDK10Q15131 360 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 QPRTQ15274 297 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 ZNF79Q15937 498 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 LRRC75BQ2VPJ9 315 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 HLA-DRB5Q30154 266 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 CLEC12AQ5QGZ9 265 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 HENMT1Q5T8I9 393 aaKnown RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 HBMQ6B0K9 141 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 DCUN1D2Q6PH85 259 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 WDR74Q6RFH5 385 aaPredicted RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 DNM1P46Q6ZS02 220 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 SLC25A48Q6ZT89 311 aaKnown RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 SLC16A13Q7RTY0 426 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 GLT6D1Q7Z4J2 308 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 GALNT10Q86SR1 603 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 DOLPP1Q86YN1 238 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 C4orf33Q8N1A6 199 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 CA13Q8N1Q1 262 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 ZNF676Q8N7Q3 588 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 ARIH2OSQ8N7S6 290 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 OR8G5Q8NG78 346 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 OR52E4Q8NGH9 312 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 OR13C4Q8NGS5 318 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 OR5B3Q8NH48 314 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TERB2Q8NHR7 220 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 LINC01006Q8NI28 216 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 SLC7A13Q8TCU3 470 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 RNF138Q8WVD3 245 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 RPUSD4Q96CM3 377 aaKnown RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 PHYHIPLQ96FC7 376 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 MRAP2Q96G30 205 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 ZNF488Q96MN9 340 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 SMIM14Q96QK8 99 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 KLF6Q99612 283 aaPredicted RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 GINS3Q9BRX5 216 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TAPBPLQ9BX59 468 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 SRXN1Q9BYN0 137 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 CHIAQ9BZP6 476 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 CHST5Q9GZS9 411 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 GLIPR2Q9H4G4 154 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 ZNF385DQ9H6B1 395 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 DOK5Q9P104 306 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 PRO0628Q9UI54 55 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 LSM7Q9UK45 103 aaKnown RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 PSG8Q9UQ74 426 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TRAPPC4Q9Y296 219 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 TP53TG1Q9Y2A0 90 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 SIGLEC9Q9Y336 463 aa2.34□□□□□ -2.03
SRP54-209ENST00000555746 AK6Q9Y3D8 172 aaKnown RBP2.34□□□□□ -2.03
SRP54-209ENST00000555746 COL7A1Q02388 2944 aa2.33□□□□□ -2.04
SRP54-209ENST00000555746 TRIP11Q15643 1979 aa2.33□□□□□ -2.04
SRP54-209ENST00000555746 IGKV6D-41A0A0C4DH26 115 aa2.33□□□□□ -2.04
SRP54-209ENST00000555746 SMIM28A0A1B0GU29 152 aa2.33□□□□□ -2.04
SRP54-209ENST00000555746 A0A1B0GW55 424 aa2.33□□□□□ -2.04
SRP54-209ENST00000555746 DAPL1A0PJW8 107 aa2.33□□□□□ -2.04
SRP54-209ENST00000555746 ISPDA4D126 451 aa2.33□□□□□ -2.04
SRP54-209ENST00000555746 FAM231BA6NCW3 169 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms