RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 H0YJW9 148 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 YPEL1O60688 119 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 UPK1BO75841 260 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 SSBP2P81877 361 aaPredicted RBP6.28□□□□□ -1.4
NEK9-206ENST00000555537 PRR20EP86478 221 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 PRR20CP86479 221 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 PRR20DP86480 221 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 PRR20BP86481 221 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 PRR20AP86496 221 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 PJVKQ0ZLH3 352 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 TBCEQ15813 527 aaPredicted RBP6.28□□□□□ -1.4
NEK9-206ENST00000555537 DEFB114Q30KQ6 69 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 TMEM30BQ3MIR4 351 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 UBE2UQ5VVX9 321 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 ZNF343Q6P1L6 599 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 GAPTQ8N292 157 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 MFSD4AQ8N468 514 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 BVESQ8NE79 360 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 RHOXF1Q8NHV9 184 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 DYNC2LI1Q8TCX1 351 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 YIPF6Q96EC8 236 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 WDR89Q96FK6 387 aaPredicted RBP6.28□□□□□ -1.4
NEK9-206ENST00000555537 ABHD14BQ96IU4 210 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 YPEL2Q96QA6 119 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 ALG8Q9BVK2 526 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 JAM3Q9BX67 310 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 BANF2Q9H503 90 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 RAB9BQ9NP90 201 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 PLCXD1Q9NUJ7 323 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 KCNIP1Q9NZI2 227 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 JPT1Q9UK76 154 aa6.28□□□□□ -1.4
NEK9-206ENST00000555537 KLK5Q9Y337 293 aaPredicted RBP6.28□□□□□ -1.4
NEK9-206ENST00000555537 TMEM212A6NML5 194 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 FAM25AB3EWG3 89 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 FAM25CB3EWG5 89 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 FAM25GB3EWG6 89 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 ETV6P41212 452 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 RPS16P62249 146 aaKnown RBP6.27□□□□□ -1.41
NEK9-206ENST00000555537 HTD2P86397 168 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 MOGAT2Q3SYC2 334 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 LGALS9CQ6DKI2 356 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 DMKNQ6E0U4 476 aaPredicted RBP6.27□□□□□ -1.41
NEK9-206ENST00000555537 THOC7Q6I9Y2 204 aaKnown RBP6.27□□□□□ -1.41
NEK9-206ENST00000555537 SIGIRRQ6IA17 410 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 TRAT1Q6PIZ9 186 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 LYG2Q86SG7 212 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 OR2AK2Q8NG84 335 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 OR2K2Q8NGT1 345 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 MCFD2Q8NI22 146 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 MRPL30Q8TCC3 161 aaKnown RBP6.27□□□□□ -1.41
NEK9-206ENST00000555537 DYNLRB2Q8TF09 96 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 IL1F10Q8WWZ1 152 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 LGALS12Q96DT0 336 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 TMEM138Q9NPI0 162 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 MBNL3Q9NUK0 354 aaKnown RBP6.27□□□□□ -1.41
NEK9-206ENST00000555537 PEMTQ9UBM1 199 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 EXOGQ9Y2C4 368 aaKnown RBP6.27□□□□□ -1.41
NEK9-206ENST00000555537 WASHC3Q9Y3C0 194 aa6.27□□□□□ -1.41
NEK9-206ENST00000555537 LOC102724200A0A096LPH7 203 aaPredicted RBP6.26□□□□□ -1.41
NEK9-206ENST00000555537 OR5H14A6NHG9 310 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 J3QRK9 145 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 BMPR1BO00238 502 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 ZNF780AO75290 641 aaPredicted RBP6.26□□□□□ -1.41
NEK9-206ENST00000555537 PROP1O75360 226 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 SC5DO75845 299 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 OR2A4O95047 310 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 HLA-AP01891 365 aaKnown RBP6.26□□□□□ -1.41
NEK9-206ENST00000555537 PRH1P02810 166 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 IGKV1-16P04430 117 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 FOLR2P14207 255 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 BDKRB2P30411 391 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 MC5RP33032 325 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 KIR2DS2P43631 304 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 TNFRSF9Q07011 255 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 SPCS2Q15005 226 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 SPANXN2Q5MJ10 180 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 GLIPR1L1Q6UWM5 242 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 LAX1Q8IWV1 398 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 OR5AN1Q8NGI8 311 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 OR13C5Q8NGS8 318 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 PHLDA1Q8WV24 401 aaPredicted RBP6.26□□□□□ -1.41
NEK9-206ENST00000555537 GHSRQ92847 366 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 SNAPC3Q92966 411 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 GALMQ96C23 342 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 KCTD12Q96CX2 325 aaKnown RBP6.26□□□□□ -1.41
NEK9-206ENST00000555537 GGTLC1Q9BX51 225 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 GABARAPL3Q9BY60 117 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 SELENOIQ9C0D9 397 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 TINAGL1Q9GZM7 467 aaPredicted RBP6.26□□□□□ -1.41
NEK9-206ENST00000555537 NXF2Q9GZY0 626 aaKnown RBP6.26□□□□□ -1.41
NEK9-206ENST00000555537 SPACA1Q9HBV2 294 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 AMBNQ9NP70 447 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 COA4Q9NYJ1 87 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 PIPOXQ9P0Z9 390 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 GMPPBQ9Y5P6 360 aa6.26□□□□□ -1.41
NEK9-206ENST00000555537 A0A075B6Q4 140 aa6.25□□□□□ -1.41
NEK9-206ENST00000555537 A0A0B4J203 849 aa6.25□□□□□ -1.41
NEK9-206ENST00000555537 A0A1W2PPK0 400 aa6.25□□□□□ -1.41
NEK9-206ENST00000555537 FAM90A23PA8MXZ1 464 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms