RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 FABP7O15540 132 aa11.37□□□□□ -0.59
SHMT2-217ENST00000555116 CD3DP04234 171 aa11.37□□□□□ -0.59
SHMT2-217ENST00000555116 DTYMKP23919 212 aa11.37□□□□□ -0.59
SHMT2-217ENST00000555116 LYG1Q8N1E2 194 aa11.37□□□□□ -0.59
SHMT2-217ENST00000555116 NUDCD2Q8WVJ2 157 aa11.37□□□□□ -0.59
SHMT2-217ENST00000555116 ZNF747Q9BV97 191 aa11.37□□□□□ -0.59
SHMT2-217ENST00000555116 NPFFR1Q9GZQ6 430 aa11.37□□□□□ -0.59
SHMT2-217ENST00000555116 IFI27L2Q9H2X8 130 aa11.37□□□□□ -0.59
SHMT2-217ENST00000555116 IGKV1D-8A0A087WSZ0 117 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 ITGB1BP1O14713 200 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 SSX5O60225 188 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 SNRNP70P08621 437 aaKnown RBP11.36□□□□□ -0.59
SHMT2-217ENST00000555116 SULT1A3P0DMM9 295 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 SULT1A4P0DMN0 295 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 CXCL3P19876 107 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 ZBTB25P24278 435 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 CEACAM6P40199 344 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 KIR2DS4P43632 304 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 MECP2P51608 486 aaKnown RBP11.36□□□□□ -0.59
SHMT2-217ENST00000555116 KIR2DS1Q14954 304 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 STEAP1BQ6NZ63 245 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 C16orf82Q7Z2V1 217 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 MOB3BQ86TA1 216 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 TMEM229BQ8NBD8 167 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 OR2AK2Q8NG84 335 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 OR4C13Q8NGP0 309 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 CABLES2Q9BTV7 478 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 BOLA1Q9Y3E2 137 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 ANK2Q01484 3957 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 SMLR1H3BR10 107 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 ST8SIA5O15466 376 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 SSNA1O43805 119 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 OR2F2O95006 317 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 FCER2P06734 321 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 FAM106CPP0CH98 169 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 PROK1P58294 105 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 TAS2R19P59542 299 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 CDK10Q15131 360 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 RBMS2Q15434 407 aaKnown RBP11.36□□□□□ -0.59
SHMT2-217ENST00000555116 IGSF11Q5DX21 431 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 GLDNQ6ZMI3 551 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-217ENST00000555116 TGIF2LXQ8IUE1 241 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 RBM14Q96PK6 669 aaKnown RBP11.36□□□□□ -0.59
SHMT2-217ENST00000555116 SLC25A33Q9BSK2 321 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 TOLLIPQ9H0E2 274 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 SLA2Q9H6Q3 261 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 ZNF702PQ9H963 129 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 SIGLEC9Q9Y336 463 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 RNF114Q9Y508 228 aa11.36□□□□□ -0.59
SHMT2-217ENST00000555116 IGHV3-72A0A0B4J1Y9 119 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 HSPA12AO43301 675 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 TXNL1O43396 289 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 DIRAS3O95661 229 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 ANXA7P20073 488 aaKnown RBP11.35□□□□□ -0.59
SHMT2-217ENST00000555116 OR3A3P47888 321 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 GNG2P59768 71 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 EBI3Q14213 229 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 ZNF833PQ6ZTB9 187 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 Q8N2B8 174 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 OR51S1Q8NGJ8 323 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 GRPEL2Q8TAA5 225 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 WFDC12Q8WWY7 111 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 PLSCR3Q9NRY6 295 aa11.35□□□□□ -0.59
SHMT2-217ENST00000555116 ZNF107Q9UII5 783 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-217ENST00000555116 SAA2-SAA4A0A096LPE2 208 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 TRBV6-7A0A0A0MS04 114 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 RAB3DO95716 219 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 IGKV1D-33P01593 117 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 IGKV1-33P01594 117 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 IL5P05113 134 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 SAA2P0DJI9 122 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-217ENST00000555116 ANXA3P12429 323 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 BLCAPP62952 87 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 Q6ZS46 218 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 ZFAND1Q8TCF1 268 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 ZNF251Q9BRH9 671 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 SEC22CQ9BRL7 303 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 GINS4Q9BRT9 223 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 ST6GALNAC5Q9BVH7 336 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 RDH8Q9NYR8 311 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 ZNF736B4DX44 427 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-217ENST00000555116 CD74P04233 296 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 AMY1AP04745 511 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 AMY2AP04746 511 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 CD1BP29016 333 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 KRTAP10-3P60369 221 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 EDARADDQ8WWZ3 215 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 ABHD14BQ96IU4 210 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 MRPL20Q9BYC9 149 aaKnown RBP11.34□□□□□ -0.59
SHMT2-217ENST00000555116 PRSS22Q9GZN4 317 aa11.34□□□□□ -0.59
SHMT2-217ENST00000555116 ANKRD34BA5PLL1 514 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 M0QYG6 137 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 BET1O15155 118 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 TMEM11P17152 192 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 HES1Q14469 280 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 HNF4GQ14541 408 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 Q5BKY6 102 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 FAM71F2Q6NXP2 309 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 Q8N6K4 173 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms