RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 FABP7O15540 132 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 CREBL2O60519 120 aaPredicted RBP8.41□□□□□ -1.06
SHMT2-215ENST00000554656 RLN1P04808 185 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 OR5H8P0DN80 308 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 HTR1DP28221 377 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 CD34P28906 385 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 UCP3P55916 312 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 ARSJQ5FYB0 599 aaPredicted RBP8.41□□□□□ -1.06
SHMT2-215ENST00000554656 HEPN1Q6WQI6 88 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 SLC25A42Q86VD7 318 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 ABHD12Q8N2K0 398 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 PLPPR1Q8TBJ4 325 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 ZFAND1Q8TCF1 268 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 MAFIPQ8WZ33 124 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 CORO2AQ92828 525 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 MRGPRFQ96AM1 343 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 CYYR1Q96J86 154 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 MED28Q9H204 178 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 DPM3Q9P2X0 92 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 SLC23A1Q9UHI7 598 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 FLVCR2Q9UPI3 526 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 LY6LH3BQJ8 138 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 CTSDP07339 412 aaPredicted RBP8.4□□□□□ -1.06
SHMT2-215ENST00000554656 CD33P20138 364 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 KRTAP10-11P60412 298 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 DHODHQ02127 395 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 AESQ08117 197 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 HMGN3Q15651 99 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 ABCA11PQ4W5N1 156 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 C6orf183Q5T699 404 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 AADACL3Q5VUY0 350 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 C16orf82Q7Z2V1 217 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 ASB13Q8WXK3 278 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 MOB3AQ96BX8 217 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 ZNF486Q96H40 463 aaPredicted RBP8.4□□□□□ -1.06
SHMT2-215ENST00000554656 SLC25A33Q9BSK2 321 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 RAB9BQ9NP90 201 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 VSIG4Q9Y279 399 aa8.4□□□□□ -1.06
SHMT2-215ENST00000554656 TRGV10A0A0A0MS01 117 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 TRBV6-7A0A0A0MS04 114 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 A0A0B4J2A0 478 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 WI2-2373I1.2A0A1W2PRP0 233 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 ODAMA1E959 279 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 OR5H14A6NHG9 310 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 SDCBPO00560 298 aaPredicted RBP8.39□□□□□ -1.07
SHMT2-215ENST00000554656 HSPB6O14558 160 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 TUSC2O75896 110 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 CCNKO75909 580 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 OR2F2O95006 317 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 OR4E1P0C645 316 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 GSTT2P0CG29 244 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 ANXA7P20073 488 aaKnown RBP8.39□□□□□ -1.07
SHMT2-215ENST00000554656 C17orf58Q2M2W7 97 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 HLA-DRB5Q30154 266 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 TMEM128Q5BJH2 165 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 TPTE2P1Q5T6R2 138 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 C11orf87Q6NUJ2 197 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 LPCAT3Q6P1A2 487 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 ETV3LQ6ZN32 361 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 MARCH1Q8TCQ1 289 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 ZNF431Q8TF32 576 aaPredicted RBP8.39□□□□□ -1.07
SHMT2-215ENST00000554656 RBM14Q96PK6 669 aaKnown RBP8.39□□□□□ -1.07
SHMT2-215ENST00000554656 ZNF2Q9BSG1 426 aaPredicted RBP8.39□□□□□ -1.07
SHMT2-215ENST00000554656 TOLLIPQ9H0E2 274 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 GAL3ST2Q9H3Q3 398 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 ING3Q9NXR8 418 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 TAS2R3Q9NYW6 316 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 KCNIP1Q9NZI2 227 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 SHPKQ9UHJ6 478 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 ZNF221Q9UK13 617 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 TRAPPC2LQ9UL33 140 aa8.39□□□□□ -1.07
SHMT2-215ENST00000554656 C14orf166Q9Y224 244 aaKnown RBP8.39□□□□□ -1.07
SHMT2-215ENST00000554656 A0A087X0M5 115 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 A0A1B0GX30 115 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 TCRBV4S1A1TA0A5B7 111 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 BUB1B-PAK6H3BSN5 160 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 SSNA1O43805 119 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 PPYP01298 95 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 SULT1A3P0DMM9 295 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 SULT1A4P0DMN0 295 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 CGB3P0DN86 165 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 CGB7P0DN87 165 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 PF4V1P10720 104 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 ZBTB25P24278 435 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 HERV-K104P61576 105 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 CBX3Q13185 183 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 ATXN7L3Q14CW9 347 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-215ENST00000554656 TMEM30BQ3MIR4 351 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 C4orf46Q504U0 113 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 CENPVQ7Z7K6 275 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-215ENST00000554656 LYG2Q86SG7 212 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 SLC38A6Q8IZM9 456 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 TCTE3Q8IZS6 198 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 ZNF596Q8TC21 504 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 ST6GAL2Q96JF0 529 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 FXYD6Q9H0Q3 95 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 C5orf66Q9H5L9 145 aa8.38□□□□□ -1.07
SHMT2-215ENST00000554656 TSSC4Q9Y5U2 329 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-215ENST00000554656 LEUTXA8MZ59 168 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 DUS4LO95620 317 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms