RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 ZNF25P17030 456 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 SH3BGRL3Q9H299 93 aa13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 IL36RNQ9UBH0 155 aa13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 ODAMA1E959 279 aa13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 H0YL77 283 aa13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 SCGB1C2P0DMR2 95 aa13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 CEACAM18A8MTB9 384 aa13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 ASPHD2Q6ICH7 369 aa13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 TMEM116Q8NCL8 245 aa13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 FGF11Q92914 225 aa13.15□□□□□ -0.3
ARHGEF40-202ENST00000553709 M0QZK8 103 aa13.15□□□□□ -0.31
ARHGEF40-202ENST00000553709 GGCTO75223 188 aaKnown RBP13.15□□□□□ -0.31
ARHGEF40-202ENST00000553709 RND3P61587 244 aa13.15□□□□□ -0.31
ARHGEF40-202ENST00000553709 TNFRSF9Q07011 255 aa13.15□□□□□ -0.31
ARHGEF40-202ENST00000553709 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 RAMP1O60894 148 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 ACAA1P09110 424 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 ZNF708P17019 499 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 RPL27AP46776 148 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 ID4P47928 161 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 OR5R1Q8NH85 324 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 ANKRD36A6QL64 1941 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 KRTCAP3Q53RY4 240 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 CCDC144NLQ6NUI1 221 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 VWA1Q6PCB0 445 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 KLF14Q8TD94 323 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 LSM10Q969L4 123 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 RARRES2Q99969 163 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 FRMPD3Q5JV73 1810 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 FTH1P19P0C7X4 201 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 ALPK2Q86TB3 2170 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 IGKV1D-43A0A0B4J1Z2 117 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 MC5RP33032 325 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 RPL13AP40429 203 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 VN1R17PQ8TDU5 208 aa13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 SNRNP40Q96DI7 357 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 CHCHD2Q9Y6H1 151 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-202ENST00000553709 MFAP2P55001 183 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 UBTD1Q9HAC8 227 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 CALYQ9NYX4 217 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 IGLV3-19P01714 112 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 MIC13Q5XKP0 118 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 PAM16Q9Y3D7 125 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 MARCH11A6NNE9 402 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 RECKO95980 971 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 MELTFP08582 738 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 LINC00869P0C866 280 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 SELENOTP62341 195 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 RPL8P62917 257 aaKnown RBP13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 ZNF658BQ4V348 819 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 LILRB1Q8NHL6 650 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 CISD1Q9NZ45 108 aaKnown RBP13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 A0A0B4J293 547 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 PPOXP50336 477 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 ZNF137PP52743 207 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 C1QL2Q7Z5L3 287 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 GBGT1Q8N5D6 347 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 TMEM140Q9NV12 185 aa13.13□□□□□ -0.31
ARHGEF40-202ENST00000553709 CORTO00230 105 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 ADRA2AP08913 450 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 PPP1R32Q7Z5V6 425 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 EIF4E3Q8N5X7 224 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 HSPB8Q9UJY1 196 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 ZG16O60844 167 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 ERVFRD-1P60508 538 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 PAFAH1B2P68402 229 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 DHRS11Q6UWP2 260 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 PCGF1Q9BSM1 259 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 MT-ND6P03923 174 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 SMIM8Q96KF7 97 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 TP53RKQ96S44 253 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 ZDHHC8Q9ULC8 765 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 CCL21O00585 134 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 PTGDSP41222 190 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 LAMTOR1Q6IAA8 161 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 PQLC2Q6ZP29 291 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 TBX15Q96SF7 602 aa13.12□□□□□ -0.31
ARHGEF40-202ENST00000553709 S1PR2O95136 353 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 FHITP49789 147 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 KCNMB1Q16558 191 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 LBHQ53QV2 105 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 PRNTQ86SH4 94 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 TM2D1Q9BX74 207 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 DOCK6Q96HP0 2047 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 SPTA1P02549 2419 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 SCN2AQ99250 2005 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 DIRC3C9JPN6 131 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 DLL1O00548 723 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 TGIF1Q15583 401 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 IZUMO4Q1ZYL8 232 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 NR2C2APQ86WQ0 139 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 OR5P3Q8WZ94 311 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 LINC00470Q9BZP3 86 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 JPT1Q9UK76 154 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 SVILO95425 2214 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 CXorf65A6NEN9 183 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 MPTX1A8MV57 137 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 CDK2AP1O14519 115 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 HSPE1P61604 102 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms