RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ARPC5LQ9BPX5 153 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 TAF9BQ9HBM6 251 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 RNF7Q9UBF6 113 aa13.11□□□□□ -0.31
ACTN1-209ENST00000553659 A0A1B0GUS0 222 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 MDFIC2A0A1B0GVS7 189 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 LINC00862A6NCI5 91 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 RNF222A6NCQ9 220 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 TAAR5O14804 337 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 MGST3O14880 152 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 HOXA3O43365 443 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-209ENST00000553659 PSPNO60542 156 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 LHBP01229 141 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 IRF2P14316 349 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 UCP1P25874 307 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 OR3A1P47881 315 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 MIDNQ504T8 468 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 ZNF818PQ6ZRF7 136 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 ZNF695Q8IW36 515 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 SLC7A5P1Q8MH63 180 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 C1orf87Q8N0U7 546 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 OR8B3Q8NGG8 313 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 OR5D13Q8NGL4 314 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 GLYATL2Q8WU03 294 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 OR8B2Q96RD0 313 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 GSKIPQ9P0R6 139 aa13.1□□□□□ -0.31
ACTN1-209ENST00000553659 LRRC30A6NM36 301 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 PSG2P11465 335 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 GABRA2P47869 451 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 BPIFB3P59826 476 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 DEFB112Q30KQ8 113 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 KRBOX4Q5JUW0 171 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 MOGAT3Q86VF5 341 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 GCSAMQ8N6F7 178 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 IL1F10Q8WWZ1 152 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 PLEKHA2Q9HB19 425 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 CCL28Q9NRJ3 127 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 LIN7CQ9NUP9 197 aaKnown RBP13.09□□□□□ -0.31
ACTN1-209ENST00000553659 PRR13Q9NZ81 148 aa13.09□□□□□ -0.31
ACTN1-209ENST00000553659 RBM7Q9Y580 266 aaKnown RBP13.09□□□□□ -0.31
ACTN1-209ENST00000553659 IGHV3-64DA0A0J9YX35 117 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 FAM181BA6NEQ2 426 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 E5RGE8 158 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 HSD17B6O14756 317 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 SPINT2O43291 252 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 PGLYRP1O75594 196 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-209ENST00000553659 CRYBA1P05813 215 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 GZMHP20718 246 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 F2RP25116 425 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 S100A10P60903 97 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 HTD2P86397 168 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 RAB32Q13637 225 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 SP6Q3SY56 376 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 FAM201AQ5SY85 155 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 TMEM268Q5VZI3 342 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 THOC7Q6I9Y2 204 aaKnown RBP13.08□□□□□ -0.32
ACTN1-209ENST00000553659 BRD3OSQ6XYD6 125 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 ZNF561Q8N587 486 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 TCTEX1D1Q8N7M0 179 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 STOML3Q8TAV4 291 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 ST8SIA2Q92186 375 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 RBPMSQ93062 196 aaKnown RBP13.08□□□□□ -0.32
ACTN1-209ENST00000553659 TP53RKQ96S44 253 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 RNF126Q9BV68 326 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 FAM234AQ9H0X4 552 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 CLN8Q9UBY8 286 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 NSG2Q9Y328 171 aa13.08□□□□□ -0.32
ACTN1-209ENST00000553659 IGKV1D-13A0A0B4J2D9 117 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 C12orf77C9JDV5 145 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 ZNF737O75373 536 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 DEDDO75618 318 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 IGKV1-13P0DP09 117 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 SLC25A6P12236 298 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 TPT1P13693 172 aaKnown RBP13.07□□□□□ -0.32
ACTN1-209ENST00000553659 MUC1P15941 1255 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-209ENST00000553659 VDAC1P21796 283 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 CEACAM6P40199 344 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 TMEM30BQ3MIR4 351 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 GPR157Q5UAW9 335 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 WDR25Q64LD2 544 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-209ENST00000553659 LYPD2Q6UXB3 125 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 Q6YL49 198 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 KIR3DL3Q8N743 410 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 OR4F5Q8NH21 305 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 LRRC20Q8TCA0 184 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 WFDC12Q8WWY7 111 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 COQ2Q96H96 371 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 SLC25A32Q9H2D1 315 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 FAM212BQ9NTI7 297 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-209ENST00000553659 OR6C3Q9NZP0 311 aa13.07□□□□□ -0.32
ACTN1-209ENST00000553659 RPS10-NUDT3A0A1W2PQS6 291 aa13.06□□□□□ -0.32
ACTN1-209ENST00000553659 MPTX1A8MV57 137 aa13.06□□□□□ -0.32
ACTN1-209ENST00000553659 H0YIZ8 118 aa13.06□□□□□ -0.32
ACTN1-209ENST00000553659 ST8SIA3O43173 380 aa13.06□□□□□ -0.32
ACTN1-209ENST00000553659 ATG12O94817 140 aa13.06□□□□□ -0.32
ACTN1-209ENST00000553659 CFDP00746 253 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-209ENST00000553659 HBZP02008 142 aa13.06□□□□□ -0.32
ACTN1-209ENST00000553659 SERPINE2P07093 398 aa13.06□□□□□ -0.32
ACTN1-209ENST00000553659 PVALBP20472 110 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-209ENST00000553659 CEBPDP49716 269 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms