RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 C3orf80F5H4A9 247 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 K7EM74 188 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 MGST3O14880 152 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 IFNA17P01571 189 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 AKR1C3P42330 323 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 CEBPDP49716 269 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-205ENST00000553474 AKR1D1P51857 326 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 RPS23P62266 143 aaKnown RBP10.79□□□□□ -0.68
SHMT2-205ENST00000553474 ARL16Q0P5N6 197 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 FOXF2Q12947 444 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 PRAMEF6Q5VXH4 476 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 RBMS3Q6XE24 437 aaKnown RBP10.79□□□□□ -0.68
SHMT2-205ENST00000553474 H2BFWTQ7Z2G1 175 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 HAPLN4Q86UW8 402 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 CYB561D1Q8N8Q1 229 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 OR52L2PQ8NGH6 319 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 MRGPRDQ8TDS7 321 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 TCTEX1D2Q8WW35 142 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 RAB39BQ96DA2 213 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 SNX22Q96L94 193 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 YPEL4Q96NS1 127 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 OR4C12Q96R67 309 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 RSG1Q9BU20 258 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 METTL1Q9UBP6 276 aaKnown RBP10.79□□□□□ -0.68
SHMT2-205ENST00000553474 A0A1W2PPH5 198 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 ODAMA1E959 279 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 C15orf65H3BRN8 121 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 ITGB1BP1O14713 200 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 RBFOX2O43251 390 aaKnown RBP eCLIP10.78□□□□□ -0.685e-15■■■■■ 33.3
SHMT2-205ENST00000553474 YPEL1O60688 119 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 RAMP3O60896 148 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 ZNF737O75373 536 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 KRASP01116 189 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 IGHV3-13P01766 116 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 PRDX2P32119 198 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 ANKRD39Q53RE8 183 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 OR10P1Q8NGE3 313 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 C2CD4CQ8TF44 421 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 LRRC29Q8WV35 223 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 ISOC2Q96AB3 205 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 MUCL1Q96DR8 90 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 RCC1LQ96I51 464 aaKnown RBP10.78□□□□□ -0.68
SHMT2-205ENST00000553474 YPEL2Q96QA6 119 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 AGMATQ9BSE5 352 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 ESRP2Q9H6T0 727 aaKnown RBP10.78□□□□□ -0.68
SHMT2-205ENST00000553474 VAX2Q9UIW0 290 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 CACNA1BQ00975 2339 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 ATRXP46100 2492 aa10.78□□□□□ -0.68
SHMT2-205ENST00000553474 SFTPCP11686 197 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 G6PCP35575 357 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 GLRXP35754 106 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 GLIPR1P48060 266 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 RPL30P62888 115 aaKnown RBP10.77□□□□□ -0.68
SHMT2-205ENST00000553474 DLK1P80370 383 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 S100A12P80511 92 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 VWC2Q2TAL6 325 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 HEPN1Q6WQI6 88 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 FAM24BQ8N5W8 94 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 OR13A1Q8NGR1 328 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 UBALD1Q8TB05 177 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 DTD1Q8TEA8 209 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 MSL2Q9HCI7 577 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 UFSP2Q9NUQ7 469 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 GAB2Q9UQC2 676 aa10.77□□□□□ -0.68
SHMT2-205ENST00000553474 TLN1Q9Y490 2541 aaKnown RBP10.77□□□□□ -0.69
SHMT2-205ENST00000553474 A0A1W2PPE2 198 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 S1PR2O95136 353 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 CRYAAP02489 173 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 TIMP3P35625 211 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 RPL35P42766 123 aaKnown RBP10.77□□□□□ -0.69
SHMT2-205ENST00000553474 KIR2DS2P43631 304 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 BPIFB3P59826 476 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 GNB2P62879 340 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 RPP30P78346 268 aaKnown RBP10.77□□□□□ -0.69
SHMT2-205ENST00000553474 ZFP82Q8N141 532 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 C5orf30Q96GV9 206 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 OPN3Q9H1Y3 402 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-205ENST00000553474 GNG13Q9P2W3 67 aa10.77□□□□□ -0.69
SHMT2-205ENST00000553474 BOD1L1Q8NFC6 3051 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 IGHV3-64DA0A0J9YX35 117 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 MAP1LC3B2A6NCE7 125 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 MARCH11A6NNE9 402 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 C17orf98A8MV24 154 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 C17orf112F2Z3M2 114 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 TGOLN2O43493 480 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 HPRT1P00492 218 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 ARG1P05089 322 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 SMIM6P0DI80 62 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 DAOP14920 347 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 SSTR5P35346 364 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 GATA4P43694 442 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 MEOX2P50222 304 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 BRWD1-AS2P59051 145 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 SNRPEP62304 92 aaKnown RBP10.76□□□□□ -0.69
SHMT2-205ENST00000553474 ZNF816Q0VGE8 651 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-205ENST00000553474 PDLIM3Q53GG5 364 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-205ENST00000553474 CD177Q8N6Q3 437 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 OR2Z1Q8NG97 314 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 OR52E5Q8NH55 327 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms