RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 DHRS12A0PJE2 317 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 EVPLLA8MZ36 301 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 DISC1C4P0D8 188 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 GOLGA6L19H0YKK7 550 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 SLC17A3O00476 420 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 TP53I11O14683 189 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 REG1BP48304 166 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 HTR4Q13639 388 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 BATFQ16520 125 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 LRRC75BQ2VPJ9 315 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 PLPPR5Q32ZL2 321 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 SYPL2Q5VXT5 272 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 SBSNQ6UWP8 590 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 CCDC121Q6ZUS5 278 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 ZNF550Q7Z398 422 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 LRRC34Q8IZ02 419 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 LTBP4Q8N2S1 1624 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 OR10D4PQ8NGN7 298 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 OR10A6Q8NH74 314 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 FNDC9Q8TBE3 224 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 GPR119Q8TDV5 335 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 MND1Q9BWT6 205 aa2.55□□□□□ -2
SCFD1-209ENST00000553280 APOMO95445 188 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 KRT75O95678 551 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 IFNA16P05015 189 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 SLC25A16P16260 332 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 HOXC5Q00444 222 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 FADDQ13158 208 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 OR2F1Q13607 317 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 HIST3H3Q16695 136 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 TMEM176BQ3YBM2 270 aaPredicted RBP2.54□□□□□ -2
SCFD1-209ENST00000553280 C1orf194Q5T5A4 169 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 SFXN4Q6P4A7 337 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 RASL11AQ6T310 242 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 CCDC42Q96M95 316 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 MGLLQ99685 303 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 FKBP14Q9NWM8 211 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 HEY1Q9Y5J3 304 aa2.54□□□□□ -2
SCFD1-209ENST00000553280 IGLV10-54A0A075B6I4 117 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 OR6C6A6NF89 314 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 C17orf98A8MV24 154 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 LY6HO94772 140 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 LYPLA2O95372 231 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 HLA-DQB2P05538 268 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 RPS17P08708 135 aaKnown RBP2.53□□□□□ -2
SCFD1-209ENST00000553280 CRYBB3P26998 211 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 MARCKSL1P49006 195 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 RAP1GDS1P52306 607 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 FAM229BQ4G0N7 80 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 TMEM31Q5JXX7 168 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 C8orf74Q6P047 294 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 C5orf46Q6UWT4 87 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 TMPPEQ6ZT21 453 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 MSRB3Q8IXL7 192 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 OR4K13Q8NH42 304 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 DIRAS2Q96HU8 199 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 CAPZA3Q96KX2 299 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 CCL13Q99616 98 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 C16orf95Q9H693 158 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 MRPL16Q9NX20 251 aaKnown RBP2.53□□□□□ -2
SCFD1-209ENST00000553280 LSM5Q9Y4Y9 91 aaKnown RBP2.53□□□□□ -2
SCFD1-209ENST00000553280 PRR14LQ5THK1 2151 aa2.53□□□□□ -2
SCFD1-209ENST00000553280 C19orf71A6NCJ1 209 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 CCL3P10147 92 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 CCL1P22362 96 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 CRHBPP24387 322 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 LPAR6P43657 344 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 SLCO1A2P46721 670 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 ZNF117Q03924 483 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 PRDX4Q13162 271 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 TAF9Q16594 264 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 SAPCD1Q5SSQ6 148 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 AMTNQ6UX39 209 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 HIST2H3AQ71DI3 136 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 C1orf158Q8N1D5 194 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 DEFB125Q8N687 156 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 OR2T27Q8NH04 317 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 ITFG2Q969R8 447 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 SLC2A9Q9NRM0 540 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 ANAPC10Q9UM13 185 aa2.52□□□□□ -2.01
SCFD1-209ENST00000553280 KLK5Q9Y337 293 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-209ENST00000553280 GRIFINA4D1Z8 144 aa2.51□□□□□ -2.01
SCFD1-209ENST00000553280 RPP14O95059 124 aaKnown RBP2.51□□□□□ -2.01
SCFD1-209ENST00000553280 SOD1P00441 154 aa2.51□□□□□ -2.01
SCFD1-209ENST00000553280 MAP2K4P45985 399 aa2.51□□□□□ -2.01
SCFD1-209ENST00000553280 CDK9P50750 372 aaKnown RBP2.51□□□□□ -2.01
SCFD1-209ENST00000553280 MRPS15P82914 257 aaKnown RBP2.51□□□□□ -2.01
SCFD1-209ENST00000553280 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
SCFD1-209ENST00000553280 TCF24Q7RTU0 167 aa2.51□□□□□ -2.01
SCFD1-209ENST00000553280 TRAPPC5Q8IUR0 188 aa2.51□□□□□ -2.01
SCFD1-209ENST00000553280 IMP4Q96G21 291 aaKnown RBP2.51□□□□□ -2.01
SCFD1-209ENST00000553280 OR51V1Q9H2C8 321 aa2.51□□□□□ -2.01
SCFD1-209ENST00000553280 HSPE1-MOB4S4R3N1 261 aa2.51□□□□□ -2.01
SCFD1-209ENST00000553280 ZSWIM8A7E2V4 1837 aa2.51□□□□□ -2.01
SCFD1-209ENST00000553280 IGHV3-73A0A0B4J1V6 119 aa2.5□□□□□ -2.01
SCFD1-209ENST00000553280 C17orf51A8MQB3 221 aa2.5□□□□□ -2.01
SCFD1-209ENST00000553280 OR11H12B2RN74 326 aa2.5□□□□□ -2.01
SCFD1-209ENST00000553280 G3V3Q6 166 aa2.5□□□□□ -2.01
SCFD1-209ENST00000553280 UBFD1O14562 309 aaKnown RBP2.5□□□□□ -2.01
SCFD1-209ENST00000553280 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms