RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 DAPL1A0PJW8 107 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 TMEM212A6NML5 194 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 FAM90A23PA8MXZ1 464 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 J3QLW9 94 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 LGALS9O00182 355 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 ST8SIA5O15466 376 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 ZNF19P17023 458 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 CBLN1P23435 193 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 SMN1Q16637 294 aaKnown RBP8.84□□□□□ -0.99
PTCH1-222ENST00000551425 ZNF57Q68EA5 555 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-222ENST00000551425 KIR2DL5AQ8N109 375 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 BPIFB6Q8NFQ5 453 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 KIR2DL5BQ8NHK3 375 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 TSEN15Q8WW01 171 aaKnown RBP8.84□□□□□ -0.99
PTCH1-222ENST00000551425 GALMQ96C23 342 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 LGALS12Q96DT0 336 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 C4orf36Q96KX1 117 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 TAS2R4Q9NYW5 299 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 ZNF230Q9UIE0 474 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-222ENST00000551425 APLNQ9ULZ1 77 aa8.84□□□□□ -0.99
PTCH1-222ENST00000551425 EFCAB10A6NFE3 127 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 FAM223BA6NKX1 122 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 XRCC3O43542 346 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 GPX5O75715 221 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 IGKV1-16P04430 117 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 GLAP06280 429 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 ZNF93P35789 620 aaPredicted RBP8.83□□□□□ -1
PTCH1-222ENST00000551425 NANOS2P60321 138 aaKnown RBP8.83□□□□□ -1
PTCH1-222ENST00000551425 EXOSC2Q13868 293 aaKnown RBP8.83□□□□□ -1
PTCH1-222ENST00000551425 GPR176Q14439 515 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 RBMS2Q15434 407 aaKnown RBP8.83□□□□□ -1
PTCH1-222ENST00000551425 SLC22A6Q4U2R8 563 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 TM4SF20Q53R12 229 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 RBM48Q5RL73 367 aaKnown RBP8.83□□□□□ -1
PTCH1-222ENST00000551425 LAIR2Q6ISS4 152 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 FAM223AQ8IWN6 122 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 ACBD7Q8N6N7 88 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 STPG3Q8N7X2 389 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 ADAD2Q8NCV1 583 aaKnown RBP8.83□□□□□ -1
PTCH1-222ENST00000551425 OR5AK2Q8NH90 309 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 KCNG3Q8TAE7 436 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 THRSPQ92748 146 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 GGHQ92820 318 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 MRPL48Q96GC5 212 aaKnown RBP8.83□□□□□ -1
PTCH1-222ENST00000551425 PDCD1LG2Q9BQ51 273 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 TMEM138Q9NPI0 162 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 STEAP1Q9UHE8 339 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 FBXL7Q9UJT9 491 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 TPRKBQ9Y3C4 175 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 PEX16Q9Y5Y5 336 aa8.83□□□□□ -1
PTCH1-222ENST00000551425 PKD1P98161 4303 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 RTL8CO15255 209 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 CPEP16870 476 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 CTRB1P17538 263 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 DCKP27707 260 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 RPS16P62249 146 aaKnown RBP8.82□□□□□ -1
PTCH1-222ENST00000551425 PJVKQ0ZLH3 352 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 FAM209BQ5JX69 171 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 DDI2Q5TDH0 399 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 CTRB2Q6GPI1 263 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 OR52I1Q8NGK6 324 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 C11orf45Q8TAV5 145 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 MRPL30Q8TCC3 161 aaKnown RBP8.82□□□□□ -1
PTCH1-222ENST00000551425 TMEM80Q96HE8 168 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 YTHDF1Q9BYJ9 559 aaKnown RBP8.82□□□□□ -1
PTCH1-222ENST00000551425 FGF20Q9NP95 211 aaPredicted RBP8.82□□□□□ -1
PTCH1-222ENST00000551425 AKIP1Q9NQ31 210 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 FBXL17Q9UF56 701 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 MLXQ9UH92 298 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 PSORS1C1Q9UIG5 152 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 BLOC1S6Q9UL45 172 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 DMRT1Q9Y5R6 373 aa8.82□□□□□ -1
PTCH1-222ENST00000551425 TRBV9A0A0B4J1U6 114 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 FAM90A7PA6NKC0 464 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 PTGES3LE9PB15 166 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 ITGB1BP1O14713 200 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 TUSC2O75896 110 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 SCAF4O95104 1147 aaKnown RBP8.81□□□□□ -1
PTCH1-222ENST00000551425 CRYGBP07316 175 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 FUT3P21217 361 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 MAP2K4P45985 399 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 RHOGP84095 191 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 ATP5G2Q06055 141 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 ST3GAL4Q11206 333 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 HMGN3Q15651 99 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 PDPNQ86YL7 162 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 CACNG8Q8WXS5 425 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 ABHD14BQ96IU4 210 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 AGMATQ9BSE5 352 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 DIMT1Q9UNQ2 313 aaKnown RBP8.81□□□□□ -1
PTCH1-222ENST00000551425 SELENOKQ9Y6D0 94 aa8.81□□□□□ -1
PTCH1-222ENST00000551425 TRAV25A0A0B4J276 109 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 UBE2QL1A1L167 161 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 TMEM213A2RRL7 107 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 GGCTO75223 188 aaKnown RBP8.8□□□□□ -1
PTCH1-222ENST00000551425 PROP1O75360 226 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 IGLV2-23P01705 113 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 OR9G9P0C7N8 305 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 MYL12AP19105 171 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 CRHBPP24387 322 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms