RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 IGHV7-81A0A0B4J1V7 117 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 IGHV3-72A0A0B4J1Y9 119 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 TMEM120BA0PK00 339 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 CPSF4LA6NMK7 179 aaKnown RBP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 PANO1I0J062 215 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 M0R135 149 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 PGRMC1O00264 195 aaKnown RBP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 EIF3HO15372 352 aaKnown RBP eCLIP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 MAGEB3O15480 346 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 XRCC2O43543 280 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 AIREO43918 545 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 TPST1O60507 370 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 SLC16A7O60669 478 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ZNF737O75373 536 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 OR2A4O95047 310 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 NDUFB2O95178 105 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 KRT75O95678 551 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 MOSP00540 346 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 IFNA5P01569 189 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 MT1HL1P0DM35 61 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 CDK2P24941 298 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 BLVRBP30043 206 aaPredicted RBP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 CDKN2CP42773 168 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 RAB7AP51149 207 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 GPM6AP51674 278 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 TPPP2P59282 170 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 DSTNP60981 165 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 NAA20P61599 178 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 CBX1P83916 185 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 FAM3AP98173 230 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 CKAP4Q07065 602 aaKnown RBP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 LRRC74AQ0VAA2 488 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 PRDX4Q13162 271 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 MADCAM1Q13477 382 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 EDDM3AQ14507 147 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 KLHL12Q53G59 568 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ZNF691Q5VV52 312 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ZNF660Q6AZW8 331 aaPredicted RBP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 PYHIN1Q6K0P9 492 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 HEPN1Q6WQI6 88 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ASCL4Q6XD76 172 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ZNF621Q6ZSS3 439 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 TRAPPC6BQ86SZ2 158 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 MOB3BQ86TA1 216 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 SERPINA12Q8IW75 414 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 CENPSQ8N2Z9 138 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 LINC00471Q8N535 108 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 TRIML2Q8N7C3 387 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 TPRX1Q8N7U7 411 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ASCC1Q8N9N2 400 aaKnown RBP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 LRRC75AQ8NAA5 344 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 Q8NAQ8 132 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 FNDC5Q8NAU1 212 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 OR8H1Q8NGG4 311 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 OR4A5Q8NH83 315 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 OR9G1Q8NH87 305 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 PFN4Q8NHR9 129 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 RFESDQ8TAC1 157 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 TWIST2Q8WVJ9 160 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 AQP3Q92482 292 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 SPTSSAQ969W0 71 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 RNF170Q96K19 258 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ZNF488Q96MN9 340 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 SPACA5Q96QH8 159 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 MCHR1Q99705 422 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 EBF4Q9BQW3 602 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 NICN1Q9BSH3 213 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 CHRDL1Q9BU40 450 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ZNF426Q9BUY5 554 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 SLC5A7Q9GZV3 580 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 OR51I2Q9H344 312 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 RERGLQ9H628 205 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ISG20L2Q9H9L3 353 aaKnown RBP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ABCB9Q9NP78 766 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 MEPEQ9NQ76 525 aaPredicted RBP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 ENPP5Q9UJA9 477 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 COPS3Q9UNS2 423 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 SLC22A13Q9Y226 551 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 FIS1Q9Y3D6 152 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 AMMECR1Q9Y4X0 333 aaPredicted RBP1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 DNAJC15Q9Y5T4 150 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 MPC1Q9Y5U8 109 aa1.45□□□□□ -2.18
DEPDC4-204ENST00000547823 IGHV1-3A0A0C4DH29 117 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 PRSS37A4D1T9 235 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 TRAPPC13A5PLN9 417 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 FAM231BA6NCW3 169 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 MFSD2BA6NFX1 497 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 C2orf70A6NJV1 201 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 ZNF736B4DX44 427 aaPredicted RBP1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 XKRYO14609 159 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 EI24O14681 340 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 CHEK1O14757 476 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 NOS1APO75052 506 aaPredicted RBP1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 CST4P01036 141 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 TRBV12-3P01733 135 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 HLA-DRB1P01911 266 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 FGF4P08620 206 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 SCTP09683 121 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 MYL2P10916 166 aa1.44□□□□□ -2.18
DEPDC4-204ENST00000547823 SLC2A1P11166 492 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms