RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 PRSS2P07478 247 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 FADS6Q8N9I5 356 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 F12P00748 615 aaPredicted RBP16.85■□□□□ 0.29
HDAC4-215ENST00000543185 FGF5P12034 268 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 PIGYQ3MUY2 71 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 COL5A3P25940 1745 aaPredicted RBP16.85■□□□□ 0.29
HDAC4-215ENST00000543185 RPL8P62917 257 aaKnown RBP16.85■□□□□ 0.29
HDAC4-215ENST00000543185 COL24A1Q17RW2 1714 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 IFNL4K9M1U5 179 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 FCGR3AP08637 254 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 TSPOP30536 169 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 ACER2Q5QJU3 275 aa16.85■□□□□ 0.29
HDAC4-215ENST00000543185 RTP5Q14D33 572 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 TAF15Q92804 592 aaKnown RBP eCLIP16.84■□□□□ 0.291e-6■□□□□ 11.1
HDAC4-215ENST00000543185 ZNF430Q9H8G1 570 aaPredicted RBP16.84■□□□□ 0.29
HDAC4-215ENST00000543185 CARHSP1Q9Y2V2 147 aaKnown RBP16.84■□□□□ 0.29
HDAC4-215ENST00000543185 DMRTC1Q5HYR2 192 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 DMRTA1Q5VZB9 504 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 TEX29Q8N6K0 151 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 B4E171 279 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 INO80CQ6PI98 192 aaPredicted RBP16.84■□□□□ 0.29
HDAC4-215ENST00000543185 RBKSQ9H477 322 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 LINC00469Q8N7U9 141 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 MARS2Q96GW9 593 aaKnown RBP16.84■□□□□ 0.29
HDAC4-215ENST00000543185 MOSPD3O75425 235 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 GSN-AS1Q9NRJ2 163 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 CCL4L1Q8NHW4 92 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 TLNRD1Q9H1K6 362 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 RNF7Q9UBF6 113 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 SERGEFQ9UGK8 458 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 H7C1H1 209 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 PARLQ9H300 379 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 ST6GALNAC2Q9UJ37 374 aa16.84■□□□□ 0.29
HDAC4-215ENST00000543185 FREM1Q5H8C1 2179 aa16.83■□□□□ 0.29
HDAC4-215ENST00000543185 TRGV8A0A0C4DH27 118 aa16.83■□□□□ 0.29
HDAC4-215ENST00000543185 GPR35Q9HC97 309 aa16.83■□□□□ 0.29
HDAC4-215ENST00000543185 KLK2P20151 261 aa16.83■□□□□ 0.29
HDAC4-215ENST00000543185 COX7A1P24310 79 aa16.83■□□□□ 0.29
HDAC4-215ENST00000543185 RIPPLY2Q5TAB7 128 aa16.83■□□□□ 0.29
HDAC4-215ENST00000543185 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.83■□□□□ 0.29
HDAC4-215ENST00000543185 C16orf92Q96LL3 132 aa16.83■□□□□ 0.29
HDAC4-215ENST00000543185 NPDC1Q9NQX5 325 aaPredicted RBP16.83■□□□□ 0.29
HDAC4-215ENST00000543185 CLDN14O95500 239 aa16.83■□□□□ 0.28
HDAC4-215ENST00000543185 RTN4RL1Q86UN2 441 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-215ENST00000543185 ADAMTSL1Q8N6G6 1762 aa16.83■□□□□ 0.28
HDAC4-215ENST00000543185 GNRHR2Q96P88 292 aa16.83■□□□□ 0.28
HDAC4-215ENST00000543185 DEFB109BQ30KR1 87 aa16.83■□□□□ 0.28
HDAC4-215ENST00000543185 PLPPR2Q96GM1 343 aa16.83■□□□□ 0.28
HDAC4-215ENST00000543185 GPX4P36969 197 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-215ENST00000543185 MED12LQ86YW9 2145 aa16.83■□□□□ 0.28
HDAC4-215ENST00000543185 SIPA1L1O43166 1804 aa16.83■□□□□ 0.28
HDAC4-215ENST00000543185 DNAJC4Q9NNZ3 241 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 HCSTQ9UBK5 93 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 GCM2O75603 506 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-215ENST00000543185 ZNF600Q6ZNG1 722 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 MS4A4AQ96JQ5 239 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 LINC00869P0C866 280 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 TRBV5-3A0A0A0MS03 114 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 MYOGP15173 224 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 ARF6P62330 175 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 SCN10AQ9Y5Y9 1956 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 ERVH48-1M5A8F1 160 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 OR2Y1Q8NGV0 311 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 CD3EP07766 207 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 AURKAIP1Q9NWT8 199 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-215ENST00000543185 TMEM50AO95807 157 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 PEX11BO96011 259 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 PRF1P14222 555 aa16.82■□□□□ 0.28
HDAC4-215ENST00000543185 H3BRM9 83 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 CEACAM21Q3KPI0 293 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 HIST1H2BAQ96A08 127 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 WIPI1Q5MNZ9 446 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-215ENST00000543185 C10orf111Q8N326 155 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 SLC25A10Q9UBX3 287 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-215ENST00000543185 CTAG1AP78358 180 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 SMOC1Q9H4F8 434 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 TET1Q8NFU7 2136 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 VWA8A3KMH1 1905 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 ZNF729A6NN14 1252 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-215ENST00000543185 LINC01559Q495D7 138 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 HKR1P10072 659 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 MMD2Q8IY49 270 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 CDIPTO14735 213 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 VSIG10L2P0DP72 767 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 RHBDD2Q6NTF9 364 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 SAXO1Q8IYX7 474 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 SMIM8Q96KF7 97 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 WNT5AP41221 380 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 NUBP1P53384 320 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 TMEM91Q6ZNR0 172 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 GCSAMQ8N6F7 178 aa16.81■□□□□ 0.28
HDAC4-215ENST00000543185 GPBAR1Q8TDU6 330 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 DERL1Q9BUN8 251 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 A0A1B0GTH9 108 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 FGF12P61328 243 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 ZNF441Q8N8Z8 693 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 ZNF576Q9H609 170 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 PCOLCE2Q9UKZ9 415 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 MARCH11A6NNE9 402 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms