RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 KNTC1P50748 2209 aa11.27□□□□□ -0.6
TNC-212ENST00000542877 LOC102724200A0A096LPH7 203 aaPredicted RBP11.27□□□□□ -0.61
TNC-212ENST00000542877 LOC390937A0A1W2PQ73 354 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 RECKO95980 971 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 CELA2AP08217 269 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 COMPP49747 757 aaPredicted RBP11.27□□□□□ -0.61
TNC-212ENST00000542877 HINT1P49773 126 aaPredicted RBP11.27□□□□□ -0.61
TNC-212ENST00000542877 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
TNC-212ENST00000542877 PSMG3Q9BT73 122 aaPredicted RBP11.27□□□□□ -0.61
TNC-212ENST00000542877 SFXN3Q9BWM7 321 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 DOCK5Q9H7D0 1870 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 A0A0B4J293 547 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 SIAH2O43255 324 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 C8orf88P0DMB2 117 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 CCL8P80075 99 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 ZNF658BQ4V348 819 aaPredicted RBP11.27□□□□□ -0.61
TNC-212ENST00000542877 IGKV3-7A0A075B6H7 116 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 PATE3B3GLJ2 98 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 SMAGPQ0VAQ4 97 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 OR1N2Q8NGR9 330 aa11.27□□□□□ -0.61
TNC-212ENST00000542877 ZNF638Q14966 1978 aaKnown RBP11.26□□□□□ -0.61
TNC-212ENST00000542877 ODAMA1E959 279 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 KLF4O43474 513 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 FABP2P12104 132 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 ZNF708P17019 499 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 CKS2P33552 79 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 CDX2Q99626 313 aaPredicted RBP11.26□□□□□ -0.61
TNC-212ENST00000542877 CFHR5Q9BXR6 569 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 DNAJC4Q9NNZ3 241 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 METTL1Q9UBP6 276 aaKnown RBP11.26□□□□□ -0.61
TNC-212ENST00000542877 MARCH11A6NNE9 402 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 NPIPB9F8W1W9 429 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 TRGC1P0CF51 173 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 ZXDCQ2QGD7 858 aaPredicted RBP11.26□□□□□ -0.61
TNC-212ENST00000542877 PQLC2LA1A4F0 135 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 ID4P47928 161 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 C21orf62-AS1Q17RA5 79 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 PMS2CLQ68D20 193 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 TNFRSF19Q9NS68 423 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 CALYQ9NYX4 217 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 JPT1Q9UK76 154 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 AHRRA9YTQ3 701 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 CDK2AP1O14519 115 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 ZG16O60844 167 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 FOLR2P14207 255 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 ZNF818PQ6ZRF7 136 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 PARLQ9H300 379 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 IDI2-AS1Q9NZ38 188 aa11.26□□□□□ -0.61
TNC-212ENST00000542877 PTPRZ1P23471 2315 aaPredicted RBP11.26□□□□□ -0.61
TNC-212ENST00000542877 PRR33A8MZF0 331 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 RPS20P60866 119 aaKnown RBP11.25□□□□□ -0.61
TNC-212ENST00000542877 ITLN1Q8WWA0 313 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 ZNF831Q5JPB2 1677 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 TMEM250H0YL14 139 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 HTN1P15515 57 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 SLC25A34Q6PIV7 304 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 C19orf48Q6RUI8 117 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 ZNF826PQ6ZT77 177 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 DDA1Q9BW61 102 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 UBTD1Q9HAC8 227 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 ZDHHC8Q9ULC8 765 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 TUBGCP6Q96RT7 1819 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 ZNF506Q5JVG8 444 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 C10orf128Q5T292 105 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 ZNF502Q8TBZ5 544 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 CARHSP1Q9Y2V2 147 aaKnown RBP11.25□□□□□ -0.61
TNC-212ENST00000542877 LNP1A1A4G5 178 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 IFNL4K9M1U5 179 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 CRXO43186 299 aaPredicted RBP11.25□□□□□ -0.61
TNC-212ENST00000542877 OR10S1Q8NGN2 331 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 SSTR5P35346 364 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 PTGDSP41222 190 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 RND2P52198 227 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 NUBP1P53384 320 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 C2orf68Q2NKX9 166 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 RAB37Q96AX2 223 aa11.25□□□□□ -0.61
TNC-212ENST00000542877 SCARF2Q96GP6 870 aaPredicted RBP11.25□□□□□ -0.61
TNC-212ENST00000542877 BTF3P20290 206 aaKnown RBP11.24□□□□□ -0.61
TNC-212ENST00000542877 ZP1P60852 638 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 SHISA3A0PJX4 238 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 TMEM229AB2RXF0 380 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 SRIP30626 198 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 ATP5IP56385 69 aaPredicted RBP11.24□□□□□ -0.61
TNC-212ENST00000542877 EGR4Q05215 589 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 ERASQ7Z444 233 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 STPG3Q8N7X2 389 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 WNT5BQ9H1J7 359 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 OPN3Q9H1Y3 402 aaPredicted RBP11.24□□□□□ -0.61
TNC-212ENST00000542877 NDUFA2O43678 99 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 VENTXO95231 258 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 GPR6P46095 362 aaPredicted RBP11.24□□□□□ -0.61
TNC-212ENST00000542877 TMEM177Q53S58 311 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 HCP5Q6MZN7 132 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 TMEM70Q9BUB7 260 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 MRPL32Q9BYC8 188 aaKnown RBP11.24□□□□□ -0.61
TNC-212ENST00000542877 RALYQ9UKM9 306 aaKnown RBP11.24□□□□□ -0.61
TNC-212ENST00000542877 S1PR2O95136 353 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms