RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 C8orf59Q8N0T1 100 aaPredicted RBP11.77□□□□□ -0.53
RTN3-211ENST00000542238 GGHQ92820 318 aa11.77□□□□□ -0.53
RTN3-211ENST00000542238 MGAT4AQ9UM21 535 aa11.77□□□□□ -0.53
RTN3-211ENST00000542238 MYL12BO14950 172 aa11.76□□□□□ -0.53
RTN3-211ENST00000542238 IL34Q6ZMJ4 242 aa11.76□□□□□ -0.53
RTN3-211ENST00000542238 Q8N402 240 aa11.76□□□□□ -0.53
RTN3-211ENST00000542238 CYGBQ8WWM9 190 aa11.76□□□□□ -0.53
RTN3-211ENST00000542238 TMEM68Q96MH6 324 aa11.76□□□□□ -0.53
RTN3-211ENST00000542238 NICN1Q9BSH3 213 aa11.76□□□□□ -0.53
RTN3-211ENST00000542238 TM2D1Q9BX74 207 aa11.76□□□□□ -0.53
RTN3-211ENST00000542238 RBM38Q9H0Z9 239 aaKnown RBP11.76□□□□□ -0.53
RTN3-211ENST00000542238 OR1A1Q9P1Q5 309 aa11.76□□□□□ -0.53
RTN3-211ENST00000542238 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
RTN3-211ENST00000542238 DNAH1Q9P2D7 4330 aa11.76□□□□□ -0.53
RTN3-211ENST00000542238 TRBV6-6A0A0A6YYG2 114 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 SNRPBP14678 240 aaKnown RBP11.75□□□□□ -0.53
RTN3-211ENST00000542238 LGALS7P47929 136 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 WNT4P56705 351 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 HLA-DRB3P79483 266 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 RPEL1Q2QD12 228 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 C1orf100Q5SVJ3 147 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 ZNF383Q8NA42 475 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 PTX4Q96A99 478 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 PLCXD1Q9NUJ7 323 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
RTN3-211ENST00000542238 SHISA3A0PJX4 238 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 PROP1O75360 226 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 BRI3O95415 125 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 ACSM3Q53FZ2 586 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 RBM48Q5RL73 367 aaKnown RBP11.74□□□□□ -0.53
RTN3-211ENST00000542238 ZNF343Q6P1L6 599 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 PHYHIPQ92561 330 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 USMG5Q96IX5 58 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 THAP7Q9BT49 309 aaPredicted RBP11.74□□□□□ -0.53
RTN3-211ENST00000542238 TINAGL1Q9GZM7 467 aaPredicted RBP11.74□□□□□ -0.53
RTN3-211ENST00000542238 SLC35D1Q9NTN3 355 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 COA4Q9NYJ1 87 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 PEMTQ9UBM1 199 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 AK3Q9UIJ7 227 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 CEPT1Q9Y6K0 416 aa11.74□□□□□ -0.53
RTN3-211ENST00000542238 A0A0B4J203 849 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 M0R1X1 148 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 OR2A4O95047 310 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 BPNT1O95861 308 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 CSN3P07498 182 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 GNAO1P09471 354 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 SCTP09683 121 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 LINC00205P59089 165 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 CBX3Q13185 183 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 UNC119Q13432 240 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 MS4A15Q8N5U1 240 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 BVESQ8NE79 360 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 OR2K2Q8NGT1 345 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 SNAPC3Q92966 411 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 CNBD2Q96M20 576 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 PHB2Q99623 299 aa11.73□□□□□ -0.53
RTN3-211ENST00000542238 URM1Q9BTM9 101 aaKnown RBP11.73□□□□□ -0.53
RTN3-211ENST00000542238 TMEM14DPA8MWL7 114 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 AIREO43918 545 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 TPPPO94811 219 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 ALDH3B2P48448 385 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 PJVKQ0ZLH3 352 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 LRRTM1Q86UE6 522 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.72□□□□□ -0.53
RTN3-211ENST00000542238 HDHD3Q9BSH5 251 aaPredicted RBP11.72□□□□□ -0.53
RTN3-211ENST00000542238 HIPK2Q9H2X6 1198 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 KCNK15Q9H427 330 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 PLEKHA3Q9HB20 300 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 RETNQ9HD89 108 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 Q9N2K0 584 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 C12orf4Q9NQ89 552 aa11.72□□□□□ -0.53
RTN3-211ENST00000542238 IZUMO1RA6ND01 250 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 SOCS1O15524 211 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 TRBV12-3P01733 135 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 SRMP19623 302 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 CD81P60033 236 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 SSBP2P81877 361 aaPredicted RBP11.71□□□□□ -0.53
RTN3-211ENST00000542238 QRFPP83859 136 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 DEFA5Q01523 94 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 INSL4Q14641 139 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 AHSA2Q719I0 299 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 LAX1Q8IWV1 398 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 NANOGP1Q8N7R0 232 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 OR6M1Q8NGM8 313 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 HARBI1Q96MB7 349 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 FAM110AQ9BQ89 295 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 LPAR5Q9H1C0 372 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 SLC2A8Q9NY64 477 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 RDH8Q9NYR8 311 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 PSORS1C1Q9UIG5 152 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 ADAM30Q9UKF2 790 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 HSF4Q9ULV5 492 aa11.71□□□□□ -0.53
RTN3-211ENST00000542238 A0A0A6YYD4 124 aa11.7□□□□□ -0.54
RTN3-211ENST00000542238 SHOXO15266 292 aa11.7□□□□□ -0.54
RTN3-211ENST00000542238 IGLV2-23P01705 113 aa11.7□□□□□ -0.54
RTN3-211ENST00000542238 CRYGBP07316 175 aa11.7□□□□□ -0.54
RTN3-211ENST00000542238 SERPINB10P48595 397 aa11.7□□□□□ -0.54
RTN3-211ENST00000542238 TAGLNQ01995 201 aaKnown RBP11.7□□□□□ -0.54
RTN3-211ENST00000542238 DYRK1AQ13627 763 aa11.7□□□□□ -0.54
RTN3-211ENST00000542238 HSD17B12Q53GQ0 312 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms