RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 TRBV23-1A0A0A0MS06 115 aa12.34□□□□□ -0.43
GCFC2-211ENST00000541687 CRISP2P16562 243 aa12.34□□□□□ -0.43
GCFC2-211ENST00000541687 MRPS11P82912 194 aaKnown RBP12.34□□□□□ -0.43
GCFC2-211ENST00000541687 SLC35E3Q7Z769 313 aa12.34□□□□□ -0.43
GCFC2-211ENST00000541687 RND1Q92730 232 aa12.34□□□□□ -0.43
GCFC2-211ENST00000541687 ZMAT5Q9UDW3 170 aaKnown RBP12.34□□□□□ -0.43
GCFC2-211ENST00000541687 OBSL1O75147 1896 aa12.34□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A10PA6NDY2 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A18PA6NE21 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A16PA6NEW6 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A20PA6NIJ5 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A7PA6NKC0 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A22PA8MWA6 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A12PA8MX19 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A5PA8MXJ8 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A23PA8MXZ1 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 S1PR2O95136 353 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A15PP0C7V4 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A13PP0C7W8 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A14PP0C7W9 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 FAM90A24PP0C7X0 464 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 B2MP61769 119 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 HSD17B10Q99714 261 aaKnown RBP12.33□□□□□ -0.43
GCFC2-211ENST00000541687 PAM16Q9Y3D7 125 aa12.33□□□□□ -0.43
GCFC2-211ENST00000541687 PRDX2P32119 198 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 CCKARP32238 428 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 BPIFB3P59826 476 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 RANP62826 216 aaKnown RBP12.33□□□□□ -0.44
GCFC2-211ENST00000541687 FA2HQ7L5A8 372 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 GGNQ86UU5 652 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 OR10A7Q8NGE5 316 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 BLNKQ8WV28 456 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 TAF15Q92804 592 aaKnown RBP eCLIP12.33□□□□□ -0.44
GCFC2-211ENST00000541687 POM121L2Q96KW2 1035 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 GPR61Q9BZJ8 451 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 ZNF71Q9NQZ8 489 aaPredicted RBP12.33□□□□□ -0.44
GCFC2-211ENST00000541687 HEATR1Q9H583 2144 aaKnown RBP12.33□□□□□ -0.44
GCFC2-211ENST00000541687 ZNF25P17030 456 aaPredicted RBP12.33□□□□□ -0.44
GCFC2-211ENST00000541687 INO80CQ6PI98 192 aaPredicted RBP12.33□□□□□ -0.44
GCFC2-211ENST00000541687 C5orf42Q9H799 3197 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 J3QR89 54 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 S100A7P31151 101 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 Q6ZN92 141 aa12.33□□□□□ -0.44
GCFC2-211ENST00000541687 BHLHA15Q7RTS1 189 aaPredicted RBP12.33□□□□□ -0.44
GCFC2-211ENST00000541687 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.33□□□□□ -0.442e-6■■■■■ 81.3
GCFC2-211ENST00000541687 M0R143 59 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 CLDN14O95500 239 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 ACAA1P09110 424 aaPredicted RBP12.32□□□□□ -0.44
GCFC2-211ENST00000541687 ATP6V1FQ16864 119 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 TMEM183BQ1AE95 376 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 LINC00596Q86U02 117 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 SLX1AQ9BQ83 275 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 DCTN5Q9BTE1 182 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 ALPK3Q96L96 1907 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 TRAV38-1A0A0B4J264 116 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 APELAP0DMC3 54 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 ADCYAP1P18509 176 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 GNG4P50150 75 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 C1orf147Q96MC9 270 aaPredicted RBP12.32□□□□□ -0.44
GCFC2-211ENST00000541687 UCP1P25874 307 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 REG1BP48304 166 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 NHLH1Q02575 133 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 C16orf82Q7Z2V1 217 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 BMPERQ8N8U9 685 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 OR4P4Q8NGL7 312 aa12.32□□□□□ -0.44
GCFC2-211ENST00000541687 CTXND1A0A1B0GTU2 59 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 HSPB1P04792 205 aaKnown RBP12.31□□□□□ -0.44
GCFC2-211ENST00000541687 GZMHP20718 246 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 FAM3BP58499 235 aaPredicted RBP12.31□□□□□ -0.44
GCFC2-211ENST00000541687 CCL8P80075 99 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 MEF2BQ02080 365 aaPredicted RBP12.31□□□□□ -0.44
GCFC2-211ENST00000541687 ZFP36L1Q07352 338 aaKnown RBP12.31□□□□□ -0.44
GCFC2-211ENST00000541687 ELOVL1Q9BW60 279 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 AUP1Q9Y679 476 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 ZNF106Q9H2Y7 1883 aaKnown RBP12.31□□□□□ -0.44
GCFC2-211ENST00000541687 C9orf172C9J069 976 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 PGA5P0DJD9 388 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 OPRK1P41145 380 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 Q0VFX4 171 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 ZNF385CQ66K41 422 aaPredicted RBP12.31□□□□□ -0.44
GCFC2-211ENST00000541687 MRPL54Q6P161 138 aaKnown RBP12.31□□□□□ -0.44
GCFC2-211ENST00000541687 DDA1Q9BW61 102 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 TRBV6-7A0A0A0MS04 114 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 HRASP01112 189 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 OR5AL1P0C617 328 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 LHX2P50458 406 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 SERF2P84101 59 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 ABLIM2Q6H8Q1 611 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 ZDHHC16Q969W1 377 aa12.31□□□□□ -0.44
GCFC2-211ENST00000541687 PQLC2LA1A4F0 135 aa12.3□□□□□ -0.44
GCFC2-211ENST00000541687 FAM157CP0CG43 387 aa12.3□□□□□ -0.44
GCFC2-211ENST00000541687 ANOS1P23352 680 aa12.3□□□□□ -0.44
GCFC2-211ENST00000541687 HIST3H3Q16695 136 aa12.3□□□□□ -0.44
GCFC2-211ENST00000541687 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
GCFC2-211ENST00000541687 PRSS3P2Q8NHM4 247 aa12.3□□□□□ -0.44
GCFC2-211ENST00000541687 PKIBQ9C010 78 aa12.3□□□□□ -0.44
GCFC2-211ENST00000541687 WIPI2Q9Y4P8 454 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms