RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 RAI1Q7Z5J4 1906 aaPredicted RBP7.22□□□□□ -1.25
THBS3-210ENST00000541576 ZNF705GA8MUZ8 300 aaPredicted RBP7.22□□□□□ -1.25
THBS3-210ENST00000541576 HSPA12AO43301 675 aa7.22□□□□□ -1.25
THBS3-210ENST00000541576 TUSC2O75896 110 aa7.22□□□□□ -1.25
THBS3-210ENST00000541576 SNRPCP09234 159 aaKnown RBP7.22□□□□□ -1.25
THBS3-210ENST00000541576 DCTN5Q9BTE1 182 aa7.22□□□□□ -1.25
THBS3-210ENST00000541576 GFOD1Q9NXC2 390 aa7.22□□□□□ -1.25
THBS3-210ENST00000541576 BTBD17A6NE02 478 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 NPIPB11E5RHQ5 1161 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 GATCO43716 136 aaKnown RBP7.21□□□□□ -1.26
THBS3-210ENST00000541576 MT-ND4LP03901 98 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 SULT1A1P50225 295 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 CAV2P51636 162 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 UCP3P55916 312 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 ABCA11PQ4W5N1 156 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 TRAT1Q6PIZ9 186 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 GALMQ96C23 342 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 OR1A1Q9P1Q5 309 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 A0A087X0M5 115 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 IGKV1D-13A0A0B4J2D9 117 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 A0A1B0GX30 115 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 LYNX1G3V0Z9 82 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 GOSR1O95249 250 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 OR2C1O95371 312 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 HBZP02008 142 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 IGKV1-13P0DP09 117 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 LYNX1P0DP58 116 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 COL8A2P25067 703 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 IL2RGP31785 369 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 CAMLGP49069 296 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 FAM53AQ6NSI3 398 aaPredicted RBP7.21□□□□□ -1.26
THBS3-210ENST00000541576 CLEC18BQ6UXF7 455 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 H1FOOQ8IZA3 346 aaPredicted RBP7.21□□□□□ -1.26
THBS3-210ENST00000541576 OR1L1Q8NH94 360 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 NEU4Q8WWR8 484 aaPredicted RBP7.21□□□□□ -1.26
THBS3-210ENST00000541576 PHYHIPLQ96FC7 376 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 C14orf144Q96I85 54 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 OR10C1Q96KK4 312 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 TCEAL7Q9BRU2 100 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 TMPRSS5Q9H3S3 457 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 OR2W1Q9Y3N9 320 aa7.21□□□□□ -1.26
THBS3-210ENST00000541576 ZNF729A6NN14 1252 aaPredicted RBP7.2□□□□□ -1.26
THBS3-210ENST00000541576 SFT2D2O95562 160 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 DUS4LO95620 317 aaKnown RBP7.2□□□□□ -1.26
THBS3-210ENST00000541576 GZMHP20718 246 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 SSTR5P35346 364 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 LPCAT3Q6P1A2 487 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 SPNS3Q6ZMD2 512 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 TGIF2LXQ8IUE1 241 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 RNF126Q9BV68 326 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 NCOR1P1Q9H4R4 102 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 OR6C3Q9NZP0 311 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 SPG11Q96JI7 2443 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 SPINT2O43291 252 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 HEXAP06865 529 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 FAM157CP0CG43 387 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 CEACAM6P40199 344 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 PIGPP57054 158 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 ZNF345Q14585 488 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 ANKRD55Q3KP44 614 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 PHLDA2Q53GA4 152 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 C15orf54Q8N8G6 183 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 SLC2A9Q9NRM0 540 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 GAR1Q9NY12 217 aaKnown RBP7.2□□□□□ -1.26
THBS3-210ENST00000541576 SLC25A10Q9UBX3 287 aaPredicted RBP7.2□□□□□ -1.26
THBS3-210ENST00000541576 UTP20O75691 2785 aaKnown RBP7.2□□□□□ -1.26
THBS3-210ENST00000541576 TEX13DA0A0J9YY54 714 aaPredicted RBP7.2□□□□□ -1.26
THBS3-210ENST00000541576 ADAM20O43506 726 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 SNAPC5O75971 98 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 NXPH3O95157 252 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 GNRHRP30968 328 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 SRSF1Q07955 248 aaKnown RBP eCLIP7.2□□□□□ -1.26
THBS3-210ENST00000541576 HNF4GQ14541 408 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 SGPP2Q8IWX5 399 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 RFESDQ8TAC1 157 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 RTN4IP1Q8WWV3 396 aaPredicted RBP7.2□□□□□ -1.26
THBS3-210ENST00000541576 NINJ1Q92982 152 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 MISP3Q96FF7 219 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 SLC5A7Q9GZV3 580 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 CYTL1Q9NRR1 136 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 DOK5Q9P104 306 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 CACFD1Q9UGQ2 172 aa7.2□□□□□ -1.26
THBS3-210ENST00000541576 DSCAML1Q8TD84 2053 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 C15orf65H3BRN8 121 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 TNFRSF13BO14836 293 aaPredicted RBP7.19□□□□□ -1.26
THBS3-210ENST00000541576 LY6HO94772 140 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 IFNA17P01571 189 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 OMGP23515 440 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 RAB5CP51148 216 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 MRPS11P82912 194 aaKnown RBP7.19□□□□□ -1.26
THBS3-210ENST00000541576 GUK1Q16774 197 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 HAGHQ16775 308 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 CR1LQ2VPA4 569 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 FGFRL1Q8N441 504 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 FAM213BQ8TBF2 198 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 GPHA2Q96T91 129 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 METTL1Q9UBP6 276 aaKnown RBP7.19□□□□□ -1.26
THBS3-210ENST00000541576 TRGV10A0A0A0MS01 117 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 CRYM-AS1A6NIL9 109 aa7.19□□□□□ -1.26
THBS3-210ENST00000541576 DBX1A6NMT0 343 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms