RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 NOL4LQ96MY1 436 aaPredicted RBP12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 PLEKHF2Q9H8W4 249 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 PPP1R3CQ9UQK1 317 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 PAM16Q9Y3D7 125 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 NUPR1O60356 82 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 CDSNQ15517 529 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 SSX7Q7RTT5 188 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 SELENOHQ8IZQ5 122 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 DVL1O14640 695 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 S100A7P31151 101 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 OR4D5Q8NGN0 318 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 SPIN2AQ99865 258 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 SPIN2BQ9BPZ2 258 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 SF3B5Q9BWJ5 86 aaKnown RBP12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 DECR2Q9NUI1 292 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 DLEU1O43261 78 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 DEFA4P12838 97 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 FAM90A2PQ658T7 463 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 TMEM211Q6ICI0 200 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 FOXL2NBQ6ZUU3 175 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 ZNF100Q8IYN0 542 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 MTCH1Q9NZJ7 389 aa12.1□□□□□ -0.47
SFSWAP-210ENST00000541286 ABCA12Q86UK0 2595 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 IGHG3P01860 377 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 OR3A1P47881 315 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 LBHQ53QV2 105 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 A0A087WWC5 75 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 ZNF503-AS2A6NEH8 195 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 LILRA1O75019 489 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 EGR1P18146 543 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 ANKRD39Q53RE8 183 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 A0A1B0GU03 582 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 PPP5D1E7EU14 171 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 WDR1O75083 606 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 METTL15P1P0C7V9 234 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 CHRNA7P36544 502 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 RAB4BP61018 213 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 C20orf204Q6ZNR8 217 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 DOLPP1Q86YN1 238 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 ZDHHC23Q8IYP9 409 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 GATAD1Q8WUU5 269 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 TBX15Q96SF7 602 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 RPRMQ9NS64 109 aa12.09□□□□□ -0.47
SFSWAP-210ENST00000541286 TRGV8A0A0C4DH27 118 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 GRIFINA4D1Z8 144 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 LYZL6O75951 148 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 PSG2P11465 335 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 ZNF324BQ6AW86 544 aaPredicted RBP12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 SMIM7Q9BQ49 75 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 FKBP11Q9NYL4 201 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 POLR3KQ9Y2Y1 108 aaPredicted RBP12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 A0A0G2JRQ6 117 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 SIRPB1O00241 398 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 SYNGR4O95473 234 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 HNF1AP20823 631 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 TMEM42Q69YG0 159 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 ZNF787Q6DD87 383 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 RBKSQ9H477 322 aa12.08□□□□□ -0.48
SFSWAP-210ENST00000541286 CDS2O95674 445 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 CA6P23280 308 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 ACSF3Q4G176 576 aaPredicted RBP12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 C22orf34Q6ZV56 151 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 MCEMP1Q8IX19 187 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 FGF23Q9GZV9 251 aaPredicted RBP12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 Q9N2K0 584 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 DOPEY2Q9Y3R5 2298 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 CYB5R3P00387 301 aaPredicted RBP12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 IFNA5P01569 189 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 HSPB1P04792 205 aaKnown RBP12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 TOMM20LQ6UXN7 152 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 ERASQ7Z444 233 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 LRTM2Q8N967 370 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 LYRM2Q9NU23 88 aaPredicted RBP12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 RNF150Q9ULK6 438 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 USP9YO00507 2555 aaPredicted RBP12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 IGKV1-6A0A0C4DH72 117 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 RHBDL1O75783 438 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 TUSC2O75896 110 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 VDAC1P21796 283 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 GALR1P47211 349 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 ERVFC1-1P60608 527 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 OR8B8Q15620 311 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 ZNF506Q5JVG8 444 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 OR8G2PQ6IF36 304 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 OR13D1Q8NGV5 346 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 PRR7Q8TB68 274 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 PLK3Q9H4B4 646 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 PLSCR2Q9NRY7 297 aa12.07□□□□□ -0.48
SFSWAP-210ENST00000541286 TRAV34A0A0B4J273 112 aa12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 SIAH2O43255 324 aa12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 SRPXP78539 464 aa12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 SPANXN5Q5MJ07 72 aa12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 SCGB1C1Q8TD33 95 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms