RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 SAA2P0DJI9 122 aaPredicted RBP7.85□□□□□ -1.15
PAAF1-209ENST00000540659 HKR1P10072 659 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 RPL12P30050 165 aaKnown RBP7.85□□□□□ -1.15
PAAF1-209ENST00000540659 G6PCP35575 357 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 RAB7AP51149 207 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 POLR2GP62487 172 aaKnown RBP eCLIP7.85□□□□□ -1.15
PAAF1-209ENST00000540659 UBA52P62987 128 aaKnown RBP7.85□□□□□ -1.15
PAAF1-209ENST00000540659 VAMP2P63027 116 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 MSMO1Q15800 293 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 ESCO2Q56NI9 601 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 CXorf66Q5JRM2 361 aaPredicted RBP7.85□□□□□ -1.15
PAAF1-209ENST00000540659 ALKAL2Q6UX46 152 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 ZNF66Q6ZN08 573 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 C1orf229Q6ZS94 237 aaPredicted RBP7.85□□□□□ -1.15
PAAF1-209ENST00000540659 SLC51BQ86UW2 128 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 OR8B3Q8NGG8 313 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 OR8B2Q96RD0 313 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 HSD17B10Q99714 261 aaKnown RBP7.85□□□□□ -1.15
PAAF1-209ENST00000540659 AGMATQ9BSE5 352 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 SMIM3Q9BZL3 60 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 ZFP57Q9NU63 452 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 MIOXQ9UGB7 285 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 NSG2Q9Y328 171 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 ARFGEF3Q5TH69 2177 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 TEX15Q9BXT5 2789 aa7.85□□□□□ -1.15
PAAF1-209ENST00000540659 KRASP01116 189 aa7.84□□□□□ -1.15
PAAF1-209ENST00000540659 DUTP33316 252 aaKnown RBP7.84□□□□□ -1.15
PAAF1-209ENST00000540659 DSCR9P59020 149 aa7.84□□□□□ -1.15
PAAF1-209ENST00000540659 NCR3LG1Q68D85 454 aa7.84□□□□□ -1.15
PAAF1-209ENST00000540659 ZNF439Q8NDP4 499 aa7.84□□□□□ -1.15
PAAF1-209ENST00000540659 OR10A7Q8NGE5 316 aa7.84□□□□□ -1.15
PAAF1-209ENST00000540659 ST8SIA2Q92186 375 aa7.84□□□□□ -1.15
PAAF1-209ENST00000540659 LSM10Q969L4 123 aaKnown RBP7.84□□□□□ -1.15
PAAF1-209ENST00000540659 RBMXL1Q96E39 390 aaKnown RBP7.84□□□□□ -1.15
PAAF1-209ENST00000540659 AQP10Q96PS8 301 aa7.84□□□□□ -1.15
PAAF1-209ENST00000540659 CHODLQ9H9P2 273 aa7.84□□□□□ -1.15
PAAF1-209ENST00000540659 CACNG5Q9UF02 275 aa7.84□□□□□ -1.15
PAAF1-209ENST00000540659 RPUSD1Q9UJJ7 312 aaKnown RBP7.84□□□□□ -1.15
PAAF1-209ENST00000540659 POLQO75417 2590 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 A0A1B0GU03 582 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 FAM24AA6NFZ4 105 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 ITGB1BP1O14713 200 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 RAB29O14966 203 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 GPR137BO60478 399 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 PROP1O75360 226 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 F12P00748 615 aaPredicted RBP7.83□□□□□ -1.16
PAAF1-209ENST00000540659 PVALBP20472 110 aaPredicted RBP7.83□□□□□ -1.16
PAAF1-209ENST00000540659 EFNA4P52798 201 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 BRWD1-AS2P59051 145 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 PRB3Q04118 309 aaPredicted RBP7.83□□□□□ -1.16
PAAF1-209ENST00000540659 NDUFA5Q16718 116 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 HEPN1Q6WQI6 88 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 ZNF841Q6ZN19 808 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 Q6ZRM9 215 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 ODF3L1Q8IXM7 274 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 ZNF295-AS1Q8N0V1 137 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 DMBX1Q8NFW5 382 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 NEIL1Q96FI4 390 aaPredicted RBP7.83□□□□□ -1.16
PAAF1-209ENST00000540659 S1PR3Q99500 378 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 MMP24Q9Y5R2 645 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 AKAP9Q99996 3911 aa7.83□□□□□ -1.16
PAAF1-209ENST00000540659 TRBV23-1A0A0A0MS06 115 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 PPIAL4CA0A0B4J2A2 164 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 NDUFS8O00217 210 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 ATG12O94817 140 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 PPIAL4GP0DN37 164 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 IAPPP10997 89 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 GPR6P46095 362 aaPredicted RBP7.82□□□□□ -1.16
PAAF1-209ENST00000540659 P2RY1P47900 373 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 THBS3P49746 956 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 CAV2P51636 162 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 DLX1P56177 255 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 DLX6P56179 175 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 RAB14P61106 215 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 GNB2P62879 340 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 TMEM155Q4W5P6 130 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 SLC25A48Q6ZT89 311 aaKnown RBP7.82□□□□□ -1.16
PAAF1-209ENST00000540659 SSX9Q7RTT3 188 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 H2BFWTQ7Z2G1 175 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 TCTEX1D1Q8N7M0 179 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 SCARB1Q8WTV0 552 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 R3HDM4Q96D70 268 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 BSCL2Q96G97 398 aaPredicted RBP7.82□□□□□ -1.16
PAAF1-209ENST00000540659 LINC00574Q9H8X3 128 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 PLEKHA2Q9HB19 425 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 CYTL1Q9NRR1 136 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 ONECUT1Q9UBC0 465 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 FBXL17Q9UF56 701 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 PRELID3BQ9Y3B1 194 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 ABCA4P78363 2273 aa7.82□□□□□ -1.16
PAAF1-209ENST00000540659 ANKRD17O75179 2603 aaKnown RBP7.82□□□□□ -1.16
PAAF1-209ENST00000540659 AKAP6Q13023 2319 aa7.81□□□□□ -1.16
PAAF1-209ENST00000540659 CSMD1Q96PZ7 3565 aa7.81□□□□□ -1.16
PAAF1-209ENST00000540659 IGSF23A1L1A6 192 aa7.81□□□□□ -1.16
PAAF1-209ENST00000540659 H3BP45 60 aa7.81□□□□□ -1.16
PAAF1-209ENST00000540659 CHST1O43916 411 aa7.81□□□□□ -1.16
PAAF1-209ENST00000540659 PITX3O75364 302 aa7.81□□□□□ -1.16
PAAF1-209ENST00000540659 RBMXL2O75526 392 aaKnown RBP7.81□□□□□ -1.16
PAAF1-209ENST00000540659 HPRT1P00492 218 aa7.81□□□□□ -1.16
PAAF1-209ENST00000540659 IGHV1-8P0DP01 117 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms