RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MALSU1Q96EH3 234 aa9.65□□□□□ -0.86
VTN-202ENST00000539746 CIB3Q96Q77 187 aaPredicted RBP9.65□□□□□ -0.86
VTN-202ENST00000539746 OR2A7Q96R45 310 aa9.65□□□□□ -0.86
VTN-202ENST00000539746 LIME1Q9H400 295 aa9.65□□□□□ -0.86
VTN-202ENST00000539746 RNF150Q9ULK6 438 aa9.65□□□□□ -0.86
VTN-202ENST00000539746 MMP24Q9Y5R2 645 aa9.65□□□□□ -0.86
VTN-202ENST00000539746 ICE1Q9Y2F5 2266 aa9.65□□□□□ -0.87
VTN-202ENST00000539746 IGHV4-61A0A0C4DH41 118 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 C13orf42A0A1B0GVH6 325 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 BUB1B-PAK6H3BSN5 160 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 H7C2Y5 167 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 SPDEFO95238 335 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 IGLV1-47P01700 117 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 MMP9P14780 707 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 HNF1AP20823 631 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 COL8A1P27658 744 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 ATP5IP56385 69 aaPredicted RBP9.64□□□□□ -0.87
VTN-202ENST00000539746 SUPT4H1P63272 117 aaKnown RBP9.64□□□□□ -0.87
VTN-202ENST00000539746 HOXA4Q00056 320 aaPredicted RBP9.64□□□□□ -0.87
VTN-202ENST00000539746 PAX8Q06710 450 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 SRSF4Q08170 494 aaKnown RBP9.64□□□□□ -0.87
VTN-202ENST00000539746 FCN2Q15485 313 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 IAH1Q2TAA2 248 aaPredicted RBP9.64□□□□□ -0.87
VTN-202ENST00000539746 VMA21Q3ZAQ7 101 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 VMO1Q7Z5L0 202 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 NOXA1Q86UR1 476 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 PNKDQ8N490 385 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 INO80EQ8NBZ0 244 aaPredicted RBP9.64□□□□□ -0.87
VTN-202ENST00000539746 DMBX1Q8NFW5 382 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 OR2T35Q8NGX2 323 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 LHX4Q969G2 390 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 SLC35D1Q9NTN3 355 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 C1RLQ9NZP8 487 aa9.64□□□□□ -0.87
VTN-202ENST00000539746 A0A0B4J293 547 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 ST8SIA3O43173 380 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 TNFSF12O43508 249 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 FCGR3BO75015 233 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 RBMXL2O75526 392 aaKnown RBP9.63□□□□□ -0.87
VTN-202ENST00000539746 C1QBP02746 253 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 FAM106CPP0CH98 169 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 PSMB6P28072 239 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 CD1BP29016 333 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 CD83Q01151 205 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 OR5AN1Q8NGI8 311 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 OR4A16Q8NH70 328 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 UBALD1Q8TB05 177 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 MSI2Q96DH6 328 aaKnown RBP9.63□□□□□ -0.87
VTN-202ENST00000539746 ST6GAL2Q96JF0 529 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 C18orf12Q96KH6 178 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 FAM210AQ96ND0 272 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 TP53RKQ96S44 253 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 SIRPDQ9H106 197 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.63□□□□□ -0.87
VTN-202ENST00000539746 PRNDQ9UKY0 176 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 FAM96BQ9Y3D0 163 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 COL12A1Q99715 3063 aa9.63□□□□□ -0.87
VTN-202ENST00000539746 MARCH11A6NNE9 402 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 L7N2F9 121 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 CYB5BO43169 146 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 ACTL6BO94805 426 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 HOXB5P09067 269 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 COX7A1P24310 79 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 LPAR6P43657 344 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 VAMP2P63027 116 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 EIF5AP63241 154 aaKnown RBP9.62□□□□□ -0.87
VTN-202ENST00000539746 AANATQ16613 207 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 NDUFA5Q16718 116 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 HSD17B13Q7Z5P4 300 aaPredicted RBP9.62□□□□□ -0.87
VTN-202ENST00000539746 SLC35G3Q8N808 338 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 OR52B4Q8NGK2 314 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 OR1S1Q8NH92 325 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 FYTTD1Q96QD9 318 aaKnown RBP9.62□□□□□ -0.87
VTN-202ENST00000539746 C7orf69Q9H7B7 122 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 ENY2Q9NPA8 101 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 HIF1ANQ9NWT6 349 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 KIAA1456Q9P272 454 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 PITPNC1Q9UKF7 332 aa9.62□□□□□ -0.87
VTN-202ENST00000539746 BTBD17A6NE02 478 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 ODF3BA8MYP8 253 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 SHOXO15266 292 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 ZFP36P26651 326 aaKnown RBP9.61□□□□□ -0.87
VTN-202ENST00000539746 MAS1LP35410 378 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 NKX2-1P43699 371 aaPredicted RBP9.61□□□□□ -0.87
VTN-202ENST00000539746 ZNF134P52741 427 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 PAX2Q02962 417 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 POU2AF1Q16633 256 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 ANKRD55Q3KP44 614 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 TMEM177Q53S58 311 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 TPTE2P1Q5T6R2 138 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 GGNBP1Q5YKI7 109 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 SELENOHQ8IZQ5 122 aaKnown RBP9.61□□□□□ -0.87
VTN-202ENST00000539746 FGFRL1Q8N441 504 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 NANPQ8TBE9 248 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 R3HDM4Q96D70 268 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 Q96MF0 132 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 RAB40CQ96S21 281 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 SLC25A31Q9H0C2 315 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 RELNP78509 3460 aa9.61□□□□□ -0.87
VTN-202ENST00000539746 SPTAN1Q13813 2472 aaKnown RBP9.61□□□□□ -0.87
VTN-202ENST00000539746 USP9YO00507 2555 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms