RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CREBL2O60519 120 aaPredicted RBP10.44□□□□□ -0.74
CCDC42-202ENST00000539522 SAA2P0DJI9 122 aaPredicted RBP10.44□□□□□ -0.74
CCDC42-202ENST00000539522 AKR1C4P17516 323 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 CD24P25063 80 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 REG1BP48304 166 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 LUMP51884 338 aaPredicted RBP10.44□□□□□ -0.74
CCDC42-202ENST00000539522 PRRX1P54821 245 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 FXYD4P59646 89 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 CBX3Q13185 183 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 ZNF833PQ6ZTB9 187 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 ZNF431Q8TF32 576 aaPredicted RBP10.44□□□□□ -0.74
CCDC42-202ENST00000539522 RSRP1Q9BUV0 290 aa10.44□□□□□ -0.74
CCDC42-202ENST00000539522 FAM90A9PA6NNJ1 464 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 LEUTXA8MZ59 168 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 FBP1P09467 338 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 RRAS2P62070 204 aaPredicted RBP10.43□□□□□ -0.74
CCDC42-202ENST00000539522 ZNF816Q0VGE8 651 aaPredicted RBP10.43□□□□□ -0.74
CCDC42-202ENST00000539522 HABP2Q14520 560 aaPredicted RBP10.43□□□□□ -0.74
CCDC42-202ENST00000539522 ABCA11PQ4W5N1 156 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 RPL39P5Q59GN2 51 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 ADAD2Q8NCV1 583 aaKnown RBP10.43□□□□□ -0.74
CCDC42-202ENST00000539522 FAM216AQ8WUB2 273 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 RTN4IP1Q8WWV3 396 aaPredicted RBP10.43□□□□□ -0.74
CCDC42-202ENST00000539522 EDARADDQ8WWZ3 215 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 TOMM40LQ969M1 308 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 PPP1R14BQ96C90 147 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 SSX3Q99909 188 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 SEC22CQ9BRL7 303 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 CHIAQ9BZP6 476 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 SLC5A7Q9GZV3 580 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 ZNF221Q9UK13 617 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 RNF150Q9ULK6 438 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 KCNIP3Q9Y2W7 256 aa10.43□□□□□ -0.74
CCDC42-202ENST00000539522 IGHV1-3A0A0C4DH29 117 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 C9orf170A2RU37 121 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 H3BUX3 64 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 HSD17B6O14756 317 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 SSNA1O43805 119 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 CHST1O43916 411 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 SLC22A5O76082 557 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 S100GP29377 79 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 GNRHRP30968 328 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 DYNLT3P51808 116 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 LGALS4P56470 323 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 UBA52P62987 128 aaKnown RBP10.42□□□□□ -0.74
CCDC42-202ENST00000539522 BAMBIQ13145 260 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 EIF4EBP1Q13541 118 aaPredicted RBP10.42□□□□□ -0.74
CCDC42-202ENST00000539522 LYG2Q86SG7 212 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 SGPP2Q8IWX5 399 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 CMTM1Q8IZ96 169 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 LYG1Q8N1E2 194 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 CCDC71LQ8N9Z2 235 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 OR2AK2Q8NG84 335 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 OR10X1Q8NGY0 326 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 CAPSLQ8WWF8 208 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 AKR1E2Q96JD6 320 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 NEURL2Q9BR09 285 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 FXYD6Q9H0Q3 95 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 TNFRSF19Q9NS68 423 aa10.42□□□□□ -0.74
CCDC42-202ENST00000539522 RBM7Q9Y580 266 aaKnown RBP10.42□□□□□ -0.74
CCDC42-202ENST00000539522 C2CD3Q4AC94 2353 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 TENM1Q9UKZ4 2725 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 A0A0B4J2A0 478 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 TEX13DA0A0J9YY54 714 aaPredicted RBP10.41□□□□□ -0.74
CCDC42-202ENST00000539522 A6NDX4 124 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 CLDN34H7C241 214 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 GPR31O00270 319 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 TIMM23O14925 209 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 TCF21O43680 179 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 SFT2D2O95562 160 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 OR8U9P0C7N5 309 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 CT45A6P0DMU7 189 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 CT45A5P0DMU8 189 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 CT45A7P0DMV0 189 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 PI3P19957 117 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 RAB7AP51149 207 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 PIGPP57054 158 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 RND3P61587 244 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 DHRS2Q13268 280 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 PPP1R1AQ13522 171 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 MSMO1Q15800 293 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 AANATQ16613 207 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 LRRC75BQ2VPJ9 315 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 KCTD9Q7L273 389 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 C12orf45Q8N5I9 185 aaPredicted RBP10.41□□□□□ -0.74
CCDC42-202ENST00000539522 DRAM1Q8N682 238 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 ZBTB34Q8NCN2 500 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 OR8U1Q8NH10 309 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 SECTM1Q8WVN6 248 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 TMEM230Q96A57 120 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 RITA1Q96K30 269 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 NABP2Q9BQ15 211 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 MRPL20Q9BYC9 149 aaKnown RBP10.41□□□□□ -0.74
CCDC42-202ENST00000539522 CCL28Q9NRJ3 127 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 SDHAF2Q9NX18 166 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 SHPKQ9UHJ6 478 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 FAM96BQ9Y3D0 163 aa10.41□□□□□ -0.74
CCDC42-202ENST00000539522 AMMECR1Q9Y4X0 333 aaPredicted RBP10.41□□□□□ -0.74
CCDC42-202ENST00000539522 IGHV3-72A0A0B4J1Y9 119 aa10.4□□□□□ -0.74
CCDC42-202ENST00000539522 CRYM-AS1A6NIL9 109 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms