RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.66□□□□□ -1.5
USP28-207ENST00000538475 MOB1BQ7L9L4 216 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 BATF2Q8N1L9 274 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 GAPTQ8N292 157 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 SCCPDHQ8NBX0 429 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 OR10G9Q8NGN4 311 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 OR10G7Q8NGN6 311 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 C11orf52Q96A22 123 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 BORCS7Q96B45 105 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 PMCHL2Q9BQD1 86 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 HDHD3Q9BSH5 251 aaPredicted RBP5.66□□□□□ -1.5
USP28-207ENST00000538475 QTRT1Q9BXR0 403 aaKnown RBP5.66□□□□□ -1.5
USP28-207ENST00000538475 ST20Q9HBF5 79 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 LIN7CQ9NUP9 197 aaKnown RBP5.66□□□□□ -1.5
USP28-207ENST00000538475 SOHLH2Q9NX45 425 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 TP53TG3Q9ULZ0 132 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 RFNGQ9Y644 331 aa5.66□□□□□ -1.5
USP28-207ENST00000538475 RTTNQ86VV8 2226 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 M0R135 149 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 AQP7O14520 342 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 TNFSF11O14788 317 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 CD5LO43866 347 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 PAGE4O60829 102 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 ZNF324O75467 553 aaPredicted RBP5.65□□□□□ -1.5
USP28-207ENST00000538475 MT-CO2P00403 227 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 LINC00869P0C866 280 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 PVRP15151 417 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 AREGP15514 252 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 FAHP16930 419 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 NPY1RP25929 384 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 TM4SF4P48230 202 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 CDC34P49427 236 aaPredicted RBP5.65□□□□□ -1.5
USP28-207ENST00000538475 SELENOVP59797 346 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 RPS18P62269 152 aaKnown RBP5.65□□□□□ -1.5
USP28-207ENST00000538475 ZNF90Q03938 601 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 TRIP6Q15654 476 aaKnown RBP5.65□□□□□ -1.5
USP28-207ENST00000538475 VAMP3Q15836 100 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 RPEL1Q2QD12 228 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 SNAI3Q3KNW1 292 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 C9orf135Q5VTT2 229 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 OTPQ5XKR4 325 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 ETFRF1Q6IPR1 90 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 ZNF818PQ6ZRF7 136 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 LRP11Q86VZ4 500 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 NIT1Q86X76 327 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 KMT5CQ86Y97 462 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 MCEMP1Q8IX19 187 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 MRPL43Q8N983 215 aaKnown RBP5.65□□□□□ -1.5
USP28-207ENST00000538475 OR10G3Q8NGC4 313 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 OR10P1Q8NGE3 313 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 OR1L6Q8NGR2 347 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 WIPF2Q8TF74 440 aaPredicted RBP5.65□□□□□ -1.5
USP28-207ENST00000538475 TMEM54Q969K7 222 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 MMABQ96EY8 250 aaPredicted RBP5.65□□□□□ -1.5
USP28-207ENST00000538475 ZNF799Q96GE5 643 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 VSIRQ9H7M9 311 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 ZNF442Q9H7R0 627 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 OSTCQ9NRP0 149 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 MED29Q9NX70 200 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 ZNF581Q9P0T4 197 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 MSRB2Q9Y3D2 182 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 OR2W1Q9Y3N9 320 aa5.65□□□□□ -1.5
USP28-207ENST00000538475 EML6Q6ZMW3 1958 aa5.65□□□□□ -1.51
USP28-207ENST00000538475 HCFC1P51610 2035 aa5.65□□□□□ -1.51
USP28-207ENST00000538475 TRGV10A0A0A0MS01 117 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 CBY3A6NI87 242 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 AQP7P3A6NL99 342 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 GJE1A6NN92 205 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 FCN1O00602 326 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 RER1O15258 196 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 DNPH1O43598 174 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 LINC00271P0C7V0 271 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 SMIM17P0DL12 118 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 CRYGSP22914 178 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 CDKN1AP38936 164 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 AMTP48728 403 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 KRTDAPP60985 99 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 CX3CL1P78423 397 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 ARG2P78540 354 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 HTD2P86397 168 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 TGFBR3Q03167 851 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 RTP5Q14D33 572 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 TBR1Q16650 682 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 CR1LQ2VPA4 569 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 HLA-BQ31612 363 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 KRTAP27-1Q3LI81 207 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 TDRG1Q3Y452 100 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 C2orf27AQ580R0 203 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 FFAR4Q5NUL3 377 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 FAM27BQ5VT28 67 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 HAPLN4Q86UW8 402 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 MED12LQ86YW9 2145 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 DEFB125Q8N687 156 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 WDR31Q8NA23 367 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 OR4S2Q8NH73 311 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 FAM216AQ8WUB2 273 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 NINJ1Q92982 152 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 PIGTQ969N2 578 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 UHRF2Q96PU4 802 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 RTN4RQ9BZR6 473 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms