RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SMIM17P0DL12 118 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 ZNF726P1Q15940 193 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 SLC25A34Q6PIV7 304 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 OR8I2Q8N0Y5 310 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 OR51E1Q8TCB6 317 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 NT5CQ8TCD5 201 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 C11orf1Q9H5F2 150 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 VSIRQ9H7M9 311 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 NAT8BQ9UHF3 227 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 TP53TG3Q9ULZ0 132 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 C1QTNF9BB2RNN3 333 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 C11orf94C9JXX5 98 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 C1QTNF9P0C862 333 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 IGLC1P0CG04 106 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 CTLA4P16410 223 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 CRYBA4P53673 196 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 RHOBP62745 196 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 ATG4DQ86TL0 474 aaPredicted RBP9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 Q8N976 141 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 OR4P4Q8NGL7 312 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 TMEM222Q9H0R3 208 aa9.29□□□□□ -0.92
CLSTN3-207ENST00000537408 IGLV1-36A0A0B4J1U3 117 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 IGKV1-8A0A0C4DH67 115 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 G3V3Y1 287 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 H0YIG0 161 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 KLRC4-KLRK1H3BQV0 150 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 MPPED1O15442 326 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SRSF10O75494 262 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 GPR6P46095 362 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 VN1R4Q7Z5H5 301 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 ST6GALNAC3Q8NDV1 305 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 OR4N2Q8NGD1 307 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 OR1K1Q8NGR3 316 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SPSB1Q96BD6 273 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 UHRF2Q96PU4 802 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SSBP4Q9BWG4 385 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 GTSF1LQ9H1H1 148 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 GNB4Q9HAV0 340 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 H3BP45 60 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 DEGS1O15121 323 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 PAGE4O60829 102 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 Q56UQ5 140 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 RHBDD2Q6NTF9 364 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 ZNF439Q8NDP4 499 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 FAM60AQ9NP50 221 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SCN2AQ99250 2005 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SAA2-SAA4A0A096LPE2 208 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 GFRA1P56159 465 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 FOXL2P58012 376 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 BVES-AS1Q5T3Y7 98 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 C6orf201Q7Z4U5 140 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SARAFQ96BY9 339 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SIGLEC12Q96PQ1 595 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 TXNIPQ9H3M7 391 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SLC25A22Q9H936 323 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 TAAR3PQ9P1P4 343 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 TRAV26-1A0A087WT03 109 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 ALG1L2C9J202 215 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SLC25A17O43808 307 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 CA2P00918 260 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 VDAC1P21796 283 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 CEBPDP49716 269 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SLAQ13239 276 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 PRSS41Q7RTY9 318 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 RPS19BP1Q86WX3 136 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 SLC25A40Q8TBP6 338 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 OR5P3Q8WZ94 311 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 ST20Q9HBF5 79 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 ARL2-SNX15V9GYD0 113 aa9.28□□□□□ -0.92
CLSTN3-207ENST00000537408 MUC21A0A0G2JKD1 596 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 MUC21A0A140T8X8 626 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 LOC102725191A0A1B0GVB3 256 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 RPL24P83731 157 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 RELBQ01201 579 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 RPEL1Q2QD12 228 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 MUC21Q5SSG8 566 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 ZNF324BQ6AW86 544 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 OR1L3Q8NH93 324 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 FAM131CQ96AQ9 280 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 TRAV36DV7A0A075B6V5 113 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 NPIPA3F8WFD2 350 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 AGFG2O95081 481 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 SERPINE2P07093 398 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 PRICKLE4Q2TBC4 344 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 IGKV1D-8A0A087WSZ0 117 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 LOC101059948A0A1B0GTJ6 334 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 PRRG2O14669 202 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 MLNRO43193 412 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 HSBP1O75506 76 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 HLA-DOBP13765 273 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 ZP4Q12836 540 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 PLPPR1Q8TBJ4 325 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 IL36BQ9NZH7 164 aa9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 BOKQ9UMX3 212 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-207ENST00000537408 RBMXL2O75526 392 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 USF1P22415 310 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 CYB561P49447 251 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 RPS18P62269 152 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms