RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 LCN15Q6UWW0 184 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 TOMM20LQ6UXN7 152 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 ASCL4Q6XD76 172 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 NUFIP2Q7Z417 695 aaKnown RBP5.57□□□□□ -1.52
USP28-202ENST00000535607 CPEB2Q7Z5Q1 589 aaKnown RBP5.57□□□□□ -1.52
USP28-202ENST00000535607 TBC1D26Q86UD7 250 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 TMEM217Q8N7C4 229 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 TCTEX1D1Q8N7M0 179 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 ZNF709Q8N972 641 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 OR5AU1Q8NGC0 362 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 OSR1Q8TAX0 266 aaPredicted RBP5.57□□□□□ -1.52
USP28-202ENST00000535607 MRPL30Q8TCC3 161 aaKnown RBP5.57□□□□□ -1.52
USP28-202ENST00000535607 RITA1Q96K30 269 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 SLC35E1Q96K37 410 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 PCGF1Q9BSM1 259 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 MRPL13Q9BYD1 178 aaKnown RBP5.57□□□□□ -1.52
USP28-202ENST00000535607 ZNF442Q9H7R0 627 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 LPAR2Q9HBW0 351 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 SOHLH2Q9NX45 425 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 ZNF586Q9NXT0 402 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 SEMA5BQ9P283 1151 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 UQCR10Q9UDW1 63 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 WIPI2Q9Y4P8 454 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 ARHGEF17Q96PE2 2063 aaPredicted RBP5.57□□□□□ -1.52
USP28-202ENST00000535607 MUC6Q6W4X9 2439 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 IGKV1-9A0A0C4DH69 117 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 LY6G6EA0A0G2JKS1 128 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 A0A0U1RQK1 487 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 LOC101059948A0A1B0GTJ6 334 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 MDFIC2A0A1B0GVS7 189 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 A0A1W2PP11 408 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 MED19A0JLT2 244 aaPredicted RBP5.56□□□□□ -1.52
USP28-202ENST00000535607 ZNF320A2RRD8 509 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 CD300LBA8K4G0 201 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 VAMP5O95183 116 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 IGLV3-1P01715 115 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 MT-ND6P03923 174 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 SLPIP03973 132 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 WNT2P09544 360 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 COX5AP20674 150 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 ACP1P24666 158 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 CHRNB4P30926 498 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 OPRM1P35372 400 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 CDKN1BP46527 198 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 GNG10P50151 68 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 RAB7AP51149 207 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 FUT6P51993 359 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 SELENOTP62341 195 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 ZNF154Q13106 437 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 P2RY6Q15077 328 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 PLPPR5Q32ZL2 321 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 OTPQ5XKR4 325 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 TEX38Q6PEX7 206 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 TEX43Q6ZNM6 134 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 PRR22Q8IZ63 422 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 C11orf42Q8N5U0 333 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 SIGLECL1Q8N7X8 197 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 NECAP1Q8NC96 275 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 SLC24A4Q8NFF2 622 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 OR10S1Q8NGN2 331 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 OR4F5Q8NH21 305 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 OR5B3Q8NH48 314 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 ZNF721Q8TF20 911 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 LSM10Q969L4 123 aaKnown RBP5.56□□□□□ -1.52
USP28-202ENST00000535607 REEP6Q96HR9 211 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 CIB3Q96Q77 187 aaPredicted RBP5.56□□□□□ -1.52
USP28-202ENST00000535607 OR4F4Q96R69 305 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 TP53RKQ96S44 253 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 RNF2Q99496 336 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 TMEM204Q9BSN7 226 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 SAMD10Q9BYL1 202 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 GLRX2Q9NS18 164 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 RPRMQ9NS64 109 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 MED29Q9NX70 200 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 BET1LQ9NYM9 111 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 PSENENQ9NZ42 101 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 CLDN16Q9Y5I7 305 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 U3KQA8 63 aa5.56□□□□□ -1.52
USP28-202ENST00000535607 TRBV11-1A0A0K0K1C0 115 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 LINC01548A6NM66 108 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 F5H5K5 113 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 M0R135 149 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 PRYO14603 147 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 CDX4O14627 284 aaPredicted RBP5.55□□□□□ -1.52
USP28-202ENST00000535607 TCF21O43680 179 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 SYNGR2O43760 224 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 LCATP04180 440 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 ESDP10768 282 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 HLA-DOBP13765 273 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 KITLGP21583 273 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 FBLP22087 321 aaKnown RBP5.55□□□□□ -1.52
USP28-202ENST00000535607 ASCL1P50553 236 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 FOXL2P58012 376 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 RPS18P62269 152 aaKnown RBP5.55□□□□□ -1.52
USP28-202ENST00000535607 MRPS11P82912 194 aaKnown RBP5.55□□□□□ -1.52
USP28-202ENST00000535607 RUNX1Q01196 453 aa5.55□□□□□ -1.52
USP28-202ENST00000535607 ZFP36L1Q07352 338 aaKnown RBP5.55□□□□□ -1.52
USP28-202ENST00000535607 TRA2AQ13595 282 aaKnown RBP eCLIP5.55□□□□□ -1.52
USP28-202ENST00000535607 RNPS1Q15287 305 aaKnown RBP5.55□□□□□ -1.52
USP28-202ENST00000535607 MSMO1Q15800 293 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms