RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 H0Y980 276 aa7.05□□□□□ -1.28
CTNND1-231ENST00000532463 DPM2O94777 84 aa7.05□□□□□ -1.28
CTNND1-231ENST00000532463 CXCL2P19875 107 aa7.05□□□□□ -1.28
CTNND1-231ENST00000532463 IFI27P40305 119 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-231ENST00000532463 ZNF660Q6AZW8 331 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-231ENST00000532463 C2orf82Q6UX34 121 aa7.05□□□□□ -1.28
CTNND1-231ENST00000532463 FAM89BQ8N5H3 189 aa7.05□□□□□ -1.28
CTNND1-231ENST00000532463 GATD1Q8NB37 220 aa7.05□□□□□ -1.28
CTNND1-231ENST00000532463 TMEFF2Q9UIK5 374 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-231ENST00000532463 IGKV6-21A0A0C4DH24 114 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 A0A1B0GUT8 65 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 RND2P52198 227 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 ORMDL3Q8N138 153 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 MRPL43Q8N983 215 aaKnown RBP7.04□□□□□ -1.28
CTNND1-231ENST00000532463 MARS2Q96GW9 593 aaKnown RBP7.04□□□□□ -1.28
CTNND1-231ENST00000532463 SSBP3Q9BWW4 388 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-231ENST00000532463 IL36BQ9NZH7 164 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 ANAPC10Q9UM13 185 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 TRACP01848 142 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 TMEM186Q96B77 213 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 ABHD17AQ96GS6 310 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 CHODLQ9H9P2 273 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 RNF186Q9NXI6 227 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 FAM90A27PA6NNH2 459 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 FAM90A26D6RGX4 464 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 CDIPTO14735 213 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 FAM106CPP0CH98 169 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 CAPZBP47756 277 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 CENPWQ5EE01 88 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 TPTE2P1Q5T6R2 138 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 FDCSPQ8NFU4 85 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 TBC1D29Q9UFV1 150 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 M0R381 172 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 OGG1O15527 345 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 C1QL1O75973 258 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 DUTP33316 252 aaKnown RBP7.04□□□□□ -1.28
CTNND1-231ENST00000532463 CLLU1OSQ5K130 101 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 CD300LDQ6UXZ3 194 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 ST20Q9HBF5 79 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 FGF22Q9HCT0 170 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 SF3B6Q9Y3B4 125 aaKnown RBP7.04□□□□□ -1.28
CTNND1-231ENST00000532463 LTBP3Q9NS15 1303 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 PEX7O00628 323 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 CTSVO60911 334 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 RPL8P62917 257 aaKnown RBP7.04□□□□□ -1.28
CTNND1-231ENST00000532463 GUSBP11Q6P575 273 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 MS4A5Q9H3V2 200 aa7.04□□□□□ -1.28
CTNND1-231ENST00000532463 FAM208AQ9UK61 1670 aaKnown RBP7.04□□□□□ -1.28
CTNND1-231ENST00000532463 SHISA7A6NL88 538 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 TMEM238C9JI98 176 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 CTLA4P16410 223 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 HOXD3P31249 432 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-231ENST00000532463 C2orf68Q2NKX9 166 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 FAM219BQ5XKK7 198 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.03□□□□□ -1.281e-8■■■□□ 16
CTNND1-231ENST00000532463 APCDD1LQ8NCL9 501 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 SIRT4Q9Y6E7 314 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-231ENST00000532463 DSPPQ9NZW4 1301 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 CNTRLQ7Z7A1 2325 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 NCR2O95944 276 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 LSM6P62312 80 aaKnown RBP7.03□□□□□ -1.28
CTNND1-231ENST00000532463 FAM78AQ5JUQ0 283 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 SPRED2Q7Z698 418 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 CRYGNQ8WXF5 182 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 KLF12Q9Y4X4 402 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 KNTC1P50748 2209 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 FOXI3A8MTJ6 420 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-231ENST00000532463 NPPCP23582 126 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 GPX4P36969 197 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-231ENST00000532463 TNFSF15O95150 251 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 BGLAPP02818 100 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 LEPP41159 167 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 TSPAN7P41732 249 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 OR9G4Q8NGQ1 327 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 CLDND2Q8NHS1 167 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 DLX4Q92988 240 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-231ENST00000532463 CNRIP1Q96F85 164 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-231ENST00000532463 LOXL4Q96JB6 756 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 NRN1Q9NPD7 142 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 DLG5Q8TDM6 1919 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 KCPQ6ZWJ8 1503 aa7.03□□□□□ -1.28
CTNND1-231ENST00000532463 ODAMA1E959 279 aa7.02□□□□□ -1.28
CTNND1-231ENST00000532463 PLA2G10O15496 165 aa7.02□□□□□ -1.28
CTNND1-231ENST00000532463 CCL2P13500 99 aa7.02□□□□□ -1.28
CTNND1-231ENST00000532463 TBR1Q16650 682 aa7.02□□□□□ -1.28
CTNND1-231ENST00000532463 SUMO4Q6EEV6 95 aa7.02□□□□□ -1.28
CTNND1-231ENST00000532463 UNQ5815/PRO19632Q6UWF5 114 aa7.02□□□□□ -1.28
CTNND1-231ENST00000532463 TNFRSF12AQ9NP84 129 aa7.02□□□□□ -1.28
CTNND1-231ENST00000532463 MRM2Q9UI43 246 aaKnown RBP7.02□□□□□ -1.28
CTNND1-231ENST00000532463 IGKV6D-21A0A0A0MT36 114 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 LINC01549A6NIU2 74 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 ITGB1BP1O14713 200 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 ERVK11-1P61568 191 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 DPTQ07507 201 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 NKG7Q16617 165 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 TCTEX1D4Q5JR98 221 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 ZNF818PQ6ZRF7 136 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 SVIPQ8NHG7 77 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 GPR146Q96CH1 333 aa7.02□□□□□ -1.29
CTNND1-231ENST00000532463 MYH1P12882 1939 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms