RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PPP1R3EQ9H7J1 279 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 IGHV3-21A0A0B4J1V1 117 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 A0A1W2PS18 150 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 HELTA6NFD8 242 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 B4DEV8 164 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 PAGE4O60829 102 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 SCTP09683 121 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 USF1P22415 310 aaPredicted RBP9.64□□□□□ -0.87
PTPRK-221ENST00000532331 ERVS71-1P61550 626 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 ABLIM2Q6H8Q1 611 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 NCOR1O75376 2440 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 TRBV5-7A0A0A0MS05 114 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 DPPA3Q6W0C5 159 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 Q6ZS92 163 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 OR5P3Q8WZ94 311 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 TMEM186Q96B77 213 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 C12orf57Q99622 126 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 DLL3Q9NYJ7 618 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 SRSF10O75494 262 aaKnown RBP9.64□□□□□ -0.87
PTPRK-221ENST00000532331 CD1BP29016 333 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 ZNF345Q14585 488 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 TMEM255AQ5JRV8 349 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 BMPERQ8N8U9 685 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 OR4C13Q8NGP0 309 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 NPVFQ9HCQ7 196 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 HLA-DQB1P01920 261 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 MMP9P14780 707 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 RPL13AP40429 203 aaKnown RBP9.63□□□□□ -0.87
PTPRK-221ENST00000532331 TFPI2P48307 235 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 TLNRD1Q9H1K6 362 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 FNDC1Q4ZHG4 1894 aaPredicted RBP9.63□□□□□ -0.87
PTPRK-221ENST00000532331 CACNA1BQ00975 2339 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 NPIPB9F8W1W9 429 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 J3KRW8 73 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 HNRNPA3P51991 378 aaKnown RBP9.63□□□□□ -0.87
PTPRK-221ENST00000532331 ZFC3H1O60293 1989 aaKnown RBP9.63□□□□□ -0.87
PTPRK-221ENST00000532331 TMEM218A2RU14 115 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 HYPMO75409 117 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 PGA5P0DJD9 388 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 LMX1BO60663 402 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 CA7P43166 264 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 LGALSLQ3ZCW2 172 aaPredicted RBP9.63□□□□□ -0.87
PTPRK-221ENST00000532331 AWAT1Q58HT5 328 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 OR4X2Q8NGF9 303 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 CORTO00230 105 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 ATP6V0CP27449 155 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 TCL1AP56279 114 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 SP5Q6BEB4 398 aaPredicted RBP9.63□□□□□ -0.87
PTPRK-221ENST00000532331 EBLN2Q6P2I7 272 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 STPG2Q8N412 459 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 OR10D4PQ8NGN7 298 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 FAM131CQ96AQ9 280 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 MS4A10Q96PG2 267 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 SRD5A3Q9H8P0 318 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 HSF4Q9ULV5 492 aa9.63□□□□□ -0.87
PTPRK-221ENST00000532331 MFNGO00587 321 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 WNT5AP41221 380 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 ATP5G2Q06055 141 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 TCF15Q12870 199 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 VAMP3Q15836 100 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 FBLIM1Q8WUP2 373 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 TMEM222Q9H0R3 208 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 JPT1Q9UK76 154 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 TNFSF18Q9UNG2 199 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 RLFQ13129 1914 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 OR4A5Q8NH83 315 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 PAXXQ9BUH6 204 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 G6PC2Q9NQR9 355 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 IGLV3-32A0A0A0MS00 114 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 C7orf66A4D0T2 115 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 CEACAM18A8MTB9 384 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 J3QR89 54 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 CCKARP32238 428 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 FDX2Q6P4F2 183 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 ZNRF1Q8ND25 227 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 METTL26Q96S19 204 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 MESP1Q9BRJ9 268 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 SPTBP11277 2137 aa9.62□□□□□ -0.87
PTPRK-221ENST00000532331 GLIPR1P48060 266 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 PPOXP50336 477 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 RPL8P62917 257 aaKnown RBP9.61□□□□□ -0.87
PTPRK-221ENST00000532331 SERF2P84101 59 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 DNM1P46Q6ZS02 220 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 TMEM116Q8NCL8 245 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 GPR132Q9UNW8 380 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 hCG_38984A0A1B0GV85 526 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 LOC390937A0A1W2PQ73 354 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 SLC25A17O43808 307 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 CELA3BP08861 270 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 RD3LP0DJH9 198 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 CRISP2P16562 243 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 DLK1P80370 383 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 Q0VFX4 171 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 PMS2P11Q13670 270 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 CD200R1LQ6Q8B3 271 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 AQP3Q92482 292 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 OR10C1Q96KK4 312 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 CHD5Q8TDI0 1954 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms