RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CHMP1AQ9HD42 196 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-212ENST00000527887 KIAA1456Q9P272 454 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 HSF4Q9ULV5 492 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 WI2-2373I1.2A0A1W2PRP0 233 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 NBR2O15453 112 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 HOXD3P31249 432 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-212ENST00000527887 MC5RP33032 325 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 DEFA1P59665 94 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 DEFA3P59666 94 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 DGCR2P98153 550 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 UNC119Q13432 240 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 IL18Q14116 193 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 C5orf64Q2M2E5 130 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 PYDC2Q56P42 97 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 LIN54Q6MZP7 749 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 TMEM65Q6PI78 240 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 LCNL1Q6ZST4 164 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 Q8N402 240 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 C4orf3Q8WVX3 66 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 IL1F10Q8WWZ1 152 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 EDARADDQ8WWZ3 215 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 RNF5Q99942 180 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 MRPL20Q9BYC9 149 aaKnown RBP11.11□□□□□ -0.63
CAPN1-212ENST00000527887 LPAR5Q9H1C0 372 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 SLC23A1Q9UHI7 598 aa11.11□□□□□ -0.63
CAPN1-212ENST00000527887 SAA2-SAA4A0A096LPE2 208 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 A0A0B4J203 849 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 TMEM272A0A1B0GTI8 110 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 NDUFA3O95167 84 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 SAA2P0DJI9 122 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-212ENST00000527887 PPIFP30405 207 aaKnown RBP11.1□□□□□ -0.63
CAPN1-212ENST00000527887 CLDN12P56749 244 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 ARL6IP1Q15041 203 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 P2RY14Q15391 338 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 RGS21Q2M5E4 152 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 C9orf66Q5T8R8 295 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 LYSMD2Q8IV50 215 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 MYOZ3Q8TDC0 251 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 IFI27L2Q9H2X8 130 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 OR51J1Q9H342 316 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 COL7A1Q02388 2944 aa11.1□□□□□ -0.63
CAPN1-212ENST00000527887 IGHV7-81A0A0B4J1V7 117 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 OR5H14A6NHG9 310 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 SULT1C2O00338 296 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 RBBP9O75884 186 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 IGLV1-40P01703 118 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 IL7P13232 177 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 ZBTB25P24278 435 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 OR3A3P47888 321 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 RAB25P57735 213 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 RUNX1Q01196 453 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 IFITM3Q01628 133 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 SSBP1Q04837 148 aaKnown RBP11.09□□□□□ -0.63
CAPN1-212ENST00000527887 FHL3Q13643 280 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 VAX1Q5SQQ9 334 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 TMEM69Q5SWH9 247 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-212ENST00000527887 TCTEX1D1Q8N7M0 179 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 ABHD1Q96SE0 405 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 B9D2Q9BPU9 175 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 NICN1Q9BSH3 213 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 VSIG4Q9Y279 399 aa11.09□□□□□ -0.63
CAPN1-212ENST00000527887 GABARAPH6UMI1 98 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 SOCS1O15524 211 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 PTTG1O95997 202 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 INSL3P51460 131 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 CRIP2P52943 208 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-212ENST00000527887 CD69Q07108 199 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 C5orf24Q7Z6I8 188 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 OR56B1Q8NGI3 324 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 SMIM4Q8WVI0 70 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 DUX3Q96PT4 197 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 AGMATQ9BSE5 352 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 C12orf4Q9NQ89 552 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 AK3Q9UIJ7 227 aa11.08□□□□□ -0.64
CAPN1-212ENST00000527887 A0A0A6YYD4 124 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 TRAV41A0A0B4J266 112 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 FOXI3A8MTJ6 420 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-212ENST00000527887 ATP6V0E1O15342 81 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 ST8SIA5O15466 376 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 HSPA12AO43301 675 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 GSTP1P09211 210 aaKnown RBP11.07□□□□□ -0.64
CAPN1-212ENST00000527887 OR8U8P0C7N1 319 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 CT45A6P0DMU7 189 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 CT45A5P0DMU8 189 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 CT45A7P0DMV0 189 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 CEACAM6P40199 344 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 HLA-DRB3P79483 266 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 TMEM267Q0VDI3 215 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-212ENST00000527887 ASAH1Q13510 395 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 BAK1Q16611 211 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 TRIQKQ629K1 86 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 ZNF491Q8N8L2 437 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 OR5AN1Q8NGI8 311 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 FCAMRQ8WWV6 532 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 CYYR1Q96J86 154 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 RITA1Q96K30 269 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 THAP7Q9BT49 309 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms