RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 IGKV1D-39P04432 117 aa10.58□□□□□ -0.72
TSKU-203ENST00000527881 RAET1LQ5VY80 246 aa10.58□□□□□ -0.72
TSKU-203ENST00000527881 OR1L1Q8NH94 360 aa10.58□□□□□ -0.72
TSKU-203ENST00000527881 LMX1AQ8TE12 382 aa10.58□□□□□ -0.72
TSKU-203ENST00000527881 CSTL1Q9H114 145 aa10.58□□□□□ -0.72
TSKU-203ENST00000527881 IGFLR1Q9H665 355 aa10.58□□□□□ -0.72
TSKU-203ENST00000527881 KCNIP2Q9NS61 270 aa10.58□□□□□ -0.72
TSKU-203ENST00000527881 TRBV20OR9-2A0A075B6H5 130 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 ZNF324O75467 553 aaPredicted RBP10.57□□□□□ -0.72
TSKU-203ENST00000527881 HSBP1O75506 76 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 S1PR2O95136 353 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 ZNF816Q0VGE8 651 aaPredicted RBP10.57□□□□□ -0.72
TSKU-203ENST00000527881 HS3ST6Q96QI5 342 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 LIN7CQ9NUP9 197 aaKnown RBP10.57□□□□□ -0.72
TSKU-203ENST00000527881 IGHV1-69-2A0A0G2JMI3 117 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 A0A1W2PS18 150 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 DEGS1O15121 323 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 ZNF32P17041 273 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 MKXQ8IYA7 352 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 REPIN1Q9BWE0 567 aaKnown RBP10.57□□□□□ -0.72
TSKU-203ENST00000527881 NCOR1P1Q9H4R4 102 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 IL36GQ9NZH8 169 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 MUC22E2RYF6 1773 aaPredicted RBP10.57□□□□□ -0.72
TSKU-203ENST00000527881 TMPRSS2O15393 492 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 EPHA8P29322 1005 aaPredicted RBP10.57□□□□□ -0.72
TSKU-203ENST00000527881 ZNF83P51522 516 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 PRRX1P54821 245 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 CLDN15P56746 228 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 Q0VG73 95 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 NIT1Q86X76 327 aa10.57□□□□□ -0.72
TSKU-203ENST00000527881 LSM10Q969L4 123 aaKnown RBP10.57□□□□□ -0.72
TSKU-203ENST00000527881 MRPS16Q9Y3D3 137 aaKnown RBP10.57□□□□□ -0.72
TSKU-203ENST00000527881 ZNF891A8MT65 544 aaPredicted RBP10.56□□□□□ -0.72
TSKU-203ENST00000527881 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 CIDEAO60543 219 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 ARL14EPLP0DKL9 152 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 G6PCP35575 357 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 PDLIM3Q53GG5 364 aaPredicted RBP10.56□□□□□ -0.72
TSKU-203ENST00000527881 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 FGFRL1Q8N441 504 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 IL19Q9UHD0 177 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 ARL2-SNX15V9GYD0 113 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 ESDP10768 282 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 FXYD3Q14802 87 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 MPV17L2Q567V2 206 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 C1orf185Q5T7R7 199 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 ZNF441Q8N8Z8 693 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 Q8N976 141 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 MEGF9Q9H1U4 602 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 WDR87Q6ZQQ6 2873 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 LRP5LA4QPB2 252 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 CA2P00918 260 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
TSKU-203ENST00000527881 OTX1P32242 354 aaPredicted RBP10.56□□□□□ -0.72
TSKU-203ENST00000527881 ZNF808Q8N4W9 903 aaPredicted RBP10.56□□□□□ -0.72
TSKU-203ENST00000527881 ZDHHC16Q969W1 377 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 NABP1Q96AH0 204 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 ZNF488Q96MN9 340 aa10.56□□□□□ -0.72
TSKU-203ENST00000527881 C19orf25Q9UFG5 118 aaPredicted RBP10.56□□□□□ -0.72
TSKU-203ENST00000527881 OR2T8A6NH00 312 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 G3V3Y1 287 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 ZG16O60844 167 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 PIAS2O75928 621 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 NUDT3O95989 172 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 LINC00271P0C7V0 271 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 HYAL1Q12794 435 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 HIST3H3Q16695 136 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 ZNF324BQ6AW86 544 aaPredicted RBP10.55□□□□□ -0.72
TSKU-203ENST00000527881 RHBDD2Q6NTF9 364 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 ASCL4Q6XD76 172 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 SLC24A4Q8NFF2 622 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 OR1L3Q8NH93 324 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 LRRC61Q9BV99 259 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 CLCF1Q9UBD9 225 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 TP73-AS1Q9UF72 201 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 RAB29O14966 203 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 RPL31P62899 125 aaKnown RBP10.55□□□□□ -0.72
TSKU-203ENST00000527881 PMCHL1Q16048 86 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 GMPPAQ96IJ6 420 aaPredicted RBP10.55□□□□□ -0.72
TSKU-203ENST00000527881 CLEC7AQ9BXN2 247 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 CD207Q9UJ71 328 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 CDC42EP3Q9UKI2 254 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 SPTY2D1-AS1A0A0U1RR47 76 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 RNASEKQ6P5S7 137 aaKnown RBP10.55□□□□□ -0.72
TSKU-203ENST00000527881 TMEM14EPQ6UXP3 125 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 DEFB119Q8N690 84 aa10.55□□□□□ -0.72
TSKU-203ENST00000527881 IGHV2-26A0A0B4J1V2 119 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 OR5B21A6NL26 309 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 M0R2Z0 102 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 DEFB133Q30KQ1 61 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 C20orf204Q6ZNR8 217 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 Q8NFD4 153 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 OR5A2Q8NGI9 324 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 OR5B3Q8NH48 314 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 KCNE4Q8WWG9 221 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 MTCH1Q9NZJ7 389 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 TRAPPC2LQ9UL33 140 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 TIMM8BQ9Y5J9 83 aaPredicted RBP10.54□□□□□ -0.72
TSKU-203ENST00000527881 HSBP1L1C9JCN9 74 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 LGALS4P56470 323 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms