RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PATZ1Q9HBE1 687 aaKnown RBP3.63□□□□□ -1.83
USP48-211ENST00000526044 TREM1Q9NP99 234 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 SCRT2Q9NQ03 307 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 PLEKHJ1Q9NW61 149 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 RHBDL2Q9NX52 303 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 MIOXQ9UGB7 285 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 PEX16Q9Y5Y5 336 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 LRBAP50851 2863 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 TENM4Q6N022 2769 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 PLCE1Q9P212 2302 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 MYO18BQ8IUG5 2567 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 FLNCQ14315 2725 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 UTP20O75691 2785 aaKnown RBP3.62□□□□□ -1.83
USP48-211ENST00000526044 IGHV4-30-2A0A087WSY4 118 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 TRAV24A0A0B4J272 114 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 FUOMA2VDF0 154 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 CEACAM18A8MTB9 384 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 K7N7A8 449 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 SIRPB1O00241 398 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 SIGLEC5O15389 551 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 PDCD6O75340 191 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 TFF1P04155 84 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 EIF4EP06730 217 aaKnown RBP3.62□□□□□ -1.83
USP48-211ENST00000526044 IGHV4-38-2P0DP08 117 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 SLC25A16P16260 332 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 HNF1AP20823 631 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 USF1P22415 310 aaPredicted RBP3.62□□□□□ -1.83
USP48-211ENST00000526044 CD1BP29016 333 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 FCGR2BP31994 310 aaPredicted RBP3.62□□□□□ -1.83
USP48-211ENST00000526044 MNDAP41218 407 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 NPBWR1P48145 328 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 CEBPDP49716 269 aaPredicted RBP3.62□□□□□ -1.83
USP48-211ENST00000526044 SNRPEP62304 92 aaKnown RBP3.62□□□□□ -1.83
USP48-211ENST00000526044 PITPNAQ00169 270 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 AESQ08117 197 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 ARFRP1Q13795 201 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 GRK1Q15835 563 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 MOGAT2Q3SYC2 334 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 ZNF876PQ49A33 203 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 PDLIM3Q53GG5 364 aaPredicted RBP3.62□□□□□ -1.83
USP48-211ENST00000526044 PAN3Q58A45 887 aaKnown RBP3.62□□□□□ -1.83
USP48-211ENST00000526044 LRRC10Q5BKY1 277 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 BTNL8Q6UX41 500 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 SIGLEC15Q6ZMC9 328 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 C17orf107Q6ZR85 190 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 DNM1P46Q6ZS02 220 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 LINC00299Q6ZSB3 139 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 GDPD3Q7L5L3 318 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 LAX1Q8IWV1 398 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 BPIFB2Q8N4F0 458 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 ZNRF1Q8ND25 227 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 OR8B3Q8NGG8 313 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 OR6Q1Q8NGQ2 317 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 NEK7Q8TDX7 302 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 C15orf40Q8WUR7 153 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 RAB39BQ96DA2 213 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 SLC25A38Q96DW6 304 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 SDSLQ96GA7 329 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 ARHGAP5-AS1Q96IT6 56 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 GAFA1Q96PS6 74 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 OR8B2Q96RD0 313 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 ATG101Q9BSB4 218 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 NICN1Q9BSH3 213 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 PECRQ9BY49 303 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 BPESC1Q9GZL8 116 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 SHARPINQ9H0F6 387 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 MIXL1Q9H2W2 232 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 SLA2Q9H6Q3 261 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 NARFLQ9H6Q4 476 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 DNAJC4Q9NNZ3 241 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 KAAG1Q9UBP8 84 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 ZNF222Q9UK12 451 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 ROS1P08922 2347 aa3.62□□□□□ -1.83
USP48-211ENST00000526044 USP9XQ93008 2570 aaPredicted RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 DOCK11Q5JSL3 2073 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 COL12A1Q99715 3063 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 ANKHD1Q8IWZ3 2542 aaKnown RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 A0A0A6YYD4 124 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 IGHV4-61A0A0C4DH41 118 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 A0A1W2PPQ1 181 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 FOXI3A8MTJ6 420 aaPredicted RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 ZNF737O75373 536 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 CA11O75493 328 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 FOXH1O75593 365 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 ECDO95905 644 aaPredicted RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 TSHBP01222 138 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 HLA-DQB1P01920 261 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 MT-ND4P03905 459 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 MELTFP08582 738 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 CD3GP09693 182 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 HIST1H1DP16402 221 aaKnown RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 GNB3P16520 340 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 GZMHP20718 246 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 CDK2P24941 298 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 UCP1P25874 307 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 ERP29P30040 261 aaKnown RBP3.61□□□□□ -1.83
USP48-211ENST00000526044 PRSS3P35030 304 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 OR3A1P47881 315 aa3.61□□□□□ -1.83
USP48-211ENST00000526044 KCNJ3P48549 501 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms