RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 PPIHO43447 177 aaKnown RBP17.05■□□□□ 0.32
SQLE-206ENST00000523430 C1QL1O75973 258 aa17.05■□□□□ 0.32
SQLE-206ENST00000523430 CAV2P51636 162 aa17.05■□□□□ 0.32
SQLE-206ENST00000523430 RAB14P61106 215 aa17.05■□□□□ 0.32
SQLE-206ENST00000523430 MRPS11P82912 194 aaKnown RBP17.05■□□□□ 0.32
SQLE-206ENST00000523430 RPL7L1Q6DKI1 246 aaKnown RBP17.05■□□□□ 0.32
SQLE-206ENST00000523430 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.05■□□□□ 0.32
SQLE-206ENST00000523430 IGSF23A1L1A6 192 aa17.04■□□□□ 0.32
SQLE-206ENST00000523430 FAM24AA6NFZ4 105 aa17.04■□□□□ 0.32
SQLE-206ENST00000523430 WRBO00258 174 aa17.04■□□□□ 0.32
SQLE-206ENST00000523430 CHST1O43916 411 aa17.04■□□□□ 0.32
SQLE-206ENST00000523430 TPT1P13693 172 aaKnown RBP17.04■□□□□ 0.32
SQLE-206ENST00000523430 PVALBP20472 110 aaPredicted RBP17.04■□□□□ 0.32
SQLE-206ENST00000523430 ZNF295-AS1Q8N0V1 137 aa17.04■□□□□ 0.32
SQLE-206ENST00000523430 OR2C3Q8N628 320 aa17.04■□□□□ 0.32
SQLE-206ENST00000523430 DDB2Q92466 427 aa17.04■□□□□ 0.32
SQLE-206ENST00000523430 TRBV23-1A0A0A0MS06 115 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 NDUFS7O75251 213 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 NMBP08949 121 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 VAMP2P63027 116 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 EWSR1Q01844 656 aaKnown RBP eCLIP17.03■□□□□ 0.32
SQLE-206ENST00000523430 LYRM2Q9NU23 88 aaPredicted RBP17.03■□□□□ 0.32
SQLE-206ENST00000523430 YLPM1P49750 1951 aaKnown RBP17.03■□□□□ 0.32
SQLE-206ENST00000523430 MARCH11A6NNE9 402 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 PAX9P55771 341 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 NHLH2Q02577 135 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 MIDNQ504T8 468 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 GPR157Q5UAW9 335 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 CD300LFQ8TDQ1 290 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 RBMXL1Q96E39 390 aaKnown RBP17.03■□□□□ 0.32
SQLE-206ENST00000523430 PHYHIPLQ96FC7 376 aa17.03■□□□□ 0.32
SQLE-206ENST00000523430 USF3Q68DE3 2245 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 LINC00862A6NCI5 91 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 TAAR5O14804 337 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 BAP18Q8IXM2 172 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 ZNF383Q8NA42 475 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 R3HDM4Q96D70 268 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 TIMD4Q96H15 378 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 CXorf58Q96LI9 332 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 S1PR3Q99500 378 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 CHODLQ9H9P2 273 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 COA4Q9NYJ1 87 aa17.02■□□□□ 0.32
SQLE-206ENST00000523430 ATG12O94817 140 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 OR8B3Q8NGG8 313 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 RAB1CQ92928 201 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 OR8B2Q96RD0 313 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 NARFLQ9H6Q4 476 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 WFDC1Q9HC57 220 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 PRELID3BQ9Y3B1 194 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 ZFYVE26Q68DK2 2539 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 H3BP45 60 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 HPRT1P00492 218 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 IAPPP10997 89 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 MMP9P14780 707 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 C11orf42Q8N5U0 333 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 TMEM252Q8N6L7 170 aa17.01■□□□□ 0.31
SQLE-206ENST00000523430 NEIL1Q96FI4 390 aaPredicted RBP17.01■□□□□ 0.31
SQLE-206ENST00000523430 TOR1AO14656 332 aa17■□□□□ 0.31
SQLE-206ENST00000523430 RBFOX2O43251 390 aaKnown RBP eCLIP17■□□□□ 0.31
SQLE-206ENST00000523430 SYNGR2O43760 224 aa17■□□□□ 0.31
SQLE-206ENST00000523430 IGHV1-8P0DP01 117 aa17■□□□□ 0.31
SQLE-206ENST00000523430 THBS3P49746 956 aa17■□□□□ 0.31
SQLE-206ENST00000523430 H2BFWTQ7Z2G1 175 aa17■□□□□ 0.31
SQLE-206ENST00000523430 VKORC1L1Q8N0U8 176 aa17■□□□□ 0.31
SQLE-206ENST00000523430 TMED6Q8WW62 240 aa17■□□□□ 0.31
SQLE-206ENST00000523430 MIOXQ9UGB7 285 aa17■□□□□ 0.31
SQLE-206ENST00000523430 KIR2DS2P43631 304 aa16.99■□□□□ 0.31
SQLE-206ENST00000523430 WDR25Q64LD2 544 aaPredicted RBP16.99■□□□□ 0.31
SQLE-206ENST00000523430 ZNF833PQ6ZTB9 187 aa16.99■□□□□ 0.31
SQLE-206ENST00000523430 SSX9Q7RTT3 188 aa16.99■□□□□ 0.31
SQLE-206ENST00000523430 GAPDHP04406 335 aaKnown RBP16.99■□□□□ 0.31
SQLE-206ENST00000523430 DLX1P56177 255 aa16.99■□□□□ 0.31
SQLE-206ENST00000523430 OR4S2Q8NH73 311 aa16.99■□□□□ 0.31
SQLE-206ENST00000523430 RAB39BQ96DA2 213 aa16.99■□□□□ 0.31
SQLE-206ENST00000523430 CITED4Q96RK1 184 aa16.99■□□□□ 0.31
SQLE-206ENST00000523430 RAB40CQ96S21 281 aa16.99■□□□□ 0.31
SQLE-206ENST00000523430 AUP1Q9Y679 476 aa16.99■□□□□ 0.31
SQLE-206ENST00000523430 CST7O76096 145 aa16.98■□□□□ 0.31
SQLE-206ENST00000523430 CRYZL1O95825 349 aa16.98■□□□□ 0.31
SQLE-206ENST00000523430 OR9G9P0C7N8 305 aa16.98■□□□□ 0.31
SQLE-206ENST00000523430 CT45A6P0DMU7 189 aa16.98■□□□□ 0.31
SQLE-206ENST00000523430 CT45A5P0DMU8 189 aa16.98■□□□□ 0.31
SQLE-206ENST00000523430 CT45A7P0DMV0 189 aa16.98■□□□□ 0.31
SQLE-206ENST00000523430 PRB3Q04118 309 aaPredicted RBP16.98■□□□□ 0.31
SQLE-206ENST00000523430 TNFRSF9Q07011 255 aa16.98■□□□□ 0.31
SQLE-206ENST00000523430 COMMD7Q86VX2 200 aa16.98■□□□□ 0.31
SQLE-206ENST00000523430 HSPB7Q9UBY9 170 aa16.98■□□□□ 0.31
SQLE-206ENST00000523430 A0A087X0M5 115 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 A0A1B0GX30 115 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 LEUTXA8MZ59 168 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 C22orf46C9J442 243 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 FAM90A26D6RGX4 464 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 J3QR06 171 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 OR2B8PP59922 312 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 TMEM267Q0VDI3 215 aaPredicted RBP16.97■□□□□ 0.31
SQLE-206ENST00000523430 ADTRPQ96IZ2 230 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 MRPL20Q9BYC9 149 aaKnown RBP16.97■□□□□ 0.31
SQLE-206ENST00000523430 SLC25A31Q9H0C2 315 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 SLC25A32Q9H2D1 315 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 RBKSQ9H477 322 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms