RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 DMDP11532 3685 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 GTF3C1Q12789 2109 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 KIAA2026Q5HYC2 2103 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 TRBV23-1A0A0A0MS06 115 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 A0A1W2PR80 420 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 CXorf65A6NEN9 183 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 RBFOX3A6NFN3 312 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 FAM90A9PA6NNJ1 464 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 DVL1O14640 695 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 SH2D1BO14796 132 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 SMAD7O15105 426 aaKnown RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 AGPAT2O15120 278 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 CHST1O43916 411 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 SSSCA1O60232 199 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 RHBDL1O75783 438 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 CEACAM4O75871 244 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 C1QL1O75973 258 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 LY86O95711 162 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 GCGP01275 180 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 IGKV1-5P01602 117 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 PRH1P02810 166 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 SRP19P09132 144 aaKnown RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 PSG2P11465 335 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 ZNF44P15621 663 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 RAB5AP20339 215 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 CA6P23280 308 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 CFHR2P36980 270 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 FHITP49789 147 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 PPT1P50897 306 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 NOVA1P51513 510 aaKnown RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 SERF2P84101 59 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 ZNF616Q08AN1 781 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 ZNF154Q13106 437 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 LPAL2Q16609 132 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 ATP6V1FQ16864 119 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 LRRC75BQ2VPJ9 315 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 C3orf36Q3SXR2 165 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 C9orf135Q5VTT2 229 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 MBNL2Q5VZF2 373 aaKnown RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 TRAT1Q6PIZ9 186 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 PET117Q6UWS5 81 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 TMEM14EPQ6UXP3 125 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 RBMS3Q6XE24 437 aaKnown RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 TMEM182Q6ZP80 229 aaPredicted RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 Q6ZRM9 215 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 FAM90A1Q86YD7 464 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 C11orf53Q8IXP5 236 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 GCNT2Q8N0V5 402 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 ZNF525Q8N782 197 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 ZNF645Q8N7E2 425 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 WDR31Q8NA23 367 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 NAXEQ8NCW5 288 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 CLDND2Q8NHS1 167 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 FAM213BQ8TBF2 198 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 NEK7Q8TDX7 302 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 C2CD4CQ8TF44 421 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 ZNF488Q96MN9 340 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 MEGF9Q9H1U4 602 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 OR51B6Q9H340 312 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 CDH20Q9HBT6 801 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 SEPSECSQ9HD40 501 aaKnown RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 KCNJ16Q9NPI9 418 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 TMEM9BQ9NQ34 198 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 CISD1Q9NZ45 108 aaKnown RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 OR1A1Q9P1Q5 309 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 ERRFI1Q9UJM3 462 aaPredicted RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 YLPM1P49750 1951 aaKnown RBP4.22□□□□□ -1.73
SDC2-204ENST00000519914 DSCAML1Q8TD84 2053 aa4.22□□□□□ -1.73
SDC2-204ENST00000519914 LOC102723971A0A1B0GUV8 181 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 TMEM30CPA0ZSE6 113 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 OOEPA6NGQ2 149 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 CBY3A6NI87 242 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 A8MWP6 167 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 B4DEV8 164 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 HS3ST1O14792 307 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 RAB29O14966 203 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 PPP1R2P9O14990 202 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 SYNGR2O43760 224 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 SOX15O60248 233 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 HAND1O96004 215 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 IFNA5P01569 189 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 SERPINE2P07093 398 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 TAGLN2P37802 199 aaKnown RBP4.21□□□□□ -1.73
SDC2-204ENST00000519914 RPS20P60866 119 aaKnown RBP4.21□□□□□ -1.73
SDC2-204ENST00000519914 UBE2NP61088 152 aaKnown RBP4.21□□□□□ -1.73
SDC2-204ENST00000519914 HBG1P69891 147 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 HBG2P69892 147 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 ARG2P78540 354 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 CCL20P78556 96 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 HTD2P86397 168 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 MZT1Q08AG7 82 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 PSG7Q13046 419 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 IGFBP7Q16270 282 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 C3AR1Q16581 482 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 VWC2Q2TAL6 325 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 TMEM249Q2WGJ8 235 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 MAJINQ3KP22 176 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 PDLIM3Q53GG5 364 aaPredicted RBP4.21□□□□□ -1.73
SDC2-204ENST00000519914 SOHLH1Q5JUK2 328 aa4.21□□□□□ -1.73
SDC2-204ENST00000519914 AKR1C8PQ5T2L2 129 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms