RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 RIPPLY2Q5TAB7 128 aa8.19□□□□□ -1.1
VCAN-210ENST00000513960 ACSM6Q6P461 480 aa8.19□□□□□ -1.1
VCAN-210ENST00000513960 VASH2Q86V25 355 aa8.19□□□□□ -1.1
VCAN-210ENST00000513960 C1orf210Q8IVY1 113 aa8.19□□□□□ -1.1
VCAN-210ENST00000513960 PLPPR1Q8TBJ4 325 aa8.19□□□□□ -1.1
VCAN-210ENST00000513960 ABHD3Q8WU67 409 aa8.19□□□□□ -1.1
VCAN-210ENST00000513960 GPR35Q9HC97 309 aa8.19□□□□□ -1.1
VCAN-210ENST00000513960 DECR2Q9NUI1 292 aa8.19□□□□□ -1.1
VCAN-210ENST00000513960 CTXND1A0A1B0GTU2 59 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 CDKN1AP38936 164 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 TFF3Q07654 80 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 PRDX4Q13162 271 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 ACTL10Q5JWF8 245 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 SLC23A3Q6PIS1 610 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 ODF3L1Q8IXM7 274 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 GCM1Q9NP62 436 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 AHCTF1Q8WYP5 2266 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 C5orf49A4QMS7 147 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 SERF1AO75920 110 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 NAPSAO96009 420 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 IGKV1D-33P01593 117 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 IGKV1-33P01594 117 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 G6PCP35575 357 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 LRRC75BQ2VPJ9 315 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 PEAR1Q5VY43 1037 aaPredicted RBP8.18□□□□□ -1.1
VCAN-210ENST00000513960 Q6ZVH6 145 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 ZNF573Q86YE8 665 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 STARD4Q96DR4 205 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 WNT5BQ9H1J7 359 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 DIRC3C9JPN6 131 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 SLC17A3O00476 420 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 LILRA1O75019 489 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 TDGF1P13385 188 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 OR8B8Q15620 311 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 ABHD17BQ5VST6 288 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 SPINK14Q6IE38 97 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 VPS25Q9BRG1 176 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 MIEN1Q9BRT3 115 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 PRRG4Q9BZD6 226 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 TMEM106BQ9NUM4 274 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 OR2W1Q9Y3N9 320 aa8.18□□□□□ -1.1
VCAN-210ENST00000513960 SNURFLB1AK76 121 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 SYNGR1O43759 233 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 SPATA45Q537H7 98 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 PDLIM3Q53GG5 364 aaPredicted RBP8.17□□□□□ -1.1
VCAN-210ENST00000513960 ABLIM2Q6H8Q1 611 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 MBD3L1Q8WWY6 194 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 HINT2Q9BX68 163 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 WNT10AQ9GZT5 417 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 DEPPQ9NTK1 212 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 B4GALT7Q9UBV7 327 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 COLQQ9Y215 455 aaPredicted RBP8.17□□□□□ -1.1
VCAN-210ENST00000513960 CTXN2P0C2S0 81 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 OR5G3P0C626 314 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 SRP14P37108 136 aaKnown RBP8.17□□□□□ -1.1
VCAN-210ENST00000513960 VAMP3Q15836 100 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 GCSAMLQ5JQS6 135 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 OR1L6Q8NGR2 347 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 DOCK7Q96N67 2140 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 TECTBQ96PL2 329 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 ZPBPQ9BS86 351 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 PPP1R14DQ9NXH3 145 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 NAT8BQ9UHF3 227 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 TRAV1-1A0A0B4J248 108 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 DEGS1O15121 323 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 SPATA46Q5T0L3 261 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 ST6GALNAC3Q8NDV1 305 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 FGFBP3Q8TAT2 258 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 WDYHV1Q96HA8 205 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 ABI3Q9P2A4 366 aa8.17□□□□□ -1.1
VCAN-210ENST00000513960 hCG_38984A0A1B0GV85 526 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 SYNGR4O95473 234 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 ACP1P24666 158 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 RANP62826 216 aaKnown RBP8.16□□□□□ -1.1
VCAN-210ENST00000513960 OR10G8Q8NGN5 311 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 MRPL18Q9H0U6 180 aaKnown RBP8.16□□□□□ -1.1
VCAN-210ENST00000513960 ZNF552Q9H707 407 aaPredicted RBP8.16□□□□□ -1.1
VCAN-210ENST00000513960 RAC2P15153 192 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 BRS3P32247 399 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 TMEM164Q5U3C3 297 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 Q6ZPA2 131 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 OR4C5Q8NGB2 326 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 APH1AQ96BI3 265 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 ABHD14BQ96IU4 210 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 PSMG3Q9BT73 122 aaPredicted RBP8.16□□□□□ -1.1
VCAN-210ENST00000513960 MRPS18CQ9Y3D5 142 aaKnown RBP8.16□□□□□ -1.1
VCAN-210ENST00000513960 RNF115Q9Y4L5 304 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 A8MXE2 369 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 C17orf112F2Z3M2 114 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 TMEM250H0YL14 139 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 CEACAM6P40199 344 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 TMEM42Q69YG0 159 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 NINJ1Q92982 152 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
VCAN-210ENST00000513960 LIN7CQ9NUP9 197 aaKnown RBP8.16□□□□□ -1.1
VCAN-210ENST00000513960 PINLYPA6NC86 204 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 C19orf67A6NJJ6 358 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 TMEM210A6NLX4 147 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 CA6P23280 308 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 HAPLN4Q86UW8 402 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms