RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 SLC25A43Q8WUT9 341 aaPredicted RBP8.04□□□□□ -1.12
USP53-207ENST00000510852 DEFB127Q9H1M4 99 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 ACKR4Q9NPB9 350 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 LSM5Q9Y4Y9 91 aaKnown RBP8.04□□□□□ -1.12
USP53-207ENST00000510852 TRAV27A0A087WT01 109 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 A0A0G2JLM5 398 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 MPC2O95563 127 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 CD8AP01732 235 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 PRTN3P24158 256 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 C16orf82Q7Z2V1 217 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 OAFQ86UD1 273 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 TFAP2CQ92754 450 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 TRAPPC2LQ9UL33 140 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 PIEZO2Q9H5I5 2752 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 ZNF732B4DXR9 585 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 OR2T1O43869 369 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 ASAH2BP0C7U1 165 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 RPL7P18124 248 aaKnown RBP8.03□□□□□ -1.12
USP53-207ENST00000510852 FHL1Q13642 323 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 OR7A5Q15622 319 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 ZNF181Q2M3W8 571 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 C19orf48Q6RUI8 117 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 GSG1LQ6UXU4 331 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 MFSD8Q8NHS3 518 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 HSPB9Q9BQS6 159 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 PLA2G12AQ9BZM1 189 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 RNF121Q9H920 327 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 SIGLEC7Q9Y286 467 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 HDGFL3Q9Y3E1 203 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 ACACBO00763 2458 aa8.03□□□□□ -1.12
USP53-207ENST00000510852 NCKAP5O14513 1909 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 PRYO14603 147 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 SPRY3O43610 288 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 CLIC3O95833 236 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 HPRT1P00492 218 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 UCHL1P09936 223 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 NPY1RP25929 384 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 GLIPR1P48060 266 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 FXYD6P3P58550 94 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 CD300EQ496F6 205 aaPredicted RBP8.02□□□□□ -1.13
USP53-207ENST00000510852 C1orf194Q5T5A4 169 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 ZFAND6Q6FIF0 208 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 ZNF555Q8NEP9 628 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 OR8D4Q8NGM9 314 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 ZNF420Q8TAQ5 688 aaPredicted RBP8.02□□□□□ -1.13
USP53-207ENST00000510852 S100ZQ8WXG8 99 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 PNPLA2Q96AD5 504 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 OR52D1Q9H346 318 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 SCN3BQ9NY72 215 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 MED12Q93074 2177 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 TPRP12270 2363 aaKnown RBP8.02□□□□□ -1.13
USP53-207ENST00000510852 TRGV5A0A0B4J1U4 118 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 A0A0J9YW62 118 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 NCR1O76036 304 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 PFN1P07737 140 aaKnown RBP8.02□□□□□ -1.13
USP53-207ENST00000510852 LHX2P50458 406 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 ERVFC1-1P60608 527 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 DGCR2P98153 550 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 SRSF4Q08170 494 aaKnown RBP8.02□□□□□ -1.13
USP53-207ENST00000510852 TMEM236Q5W0B7 351 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 PRSS54Q6PEW0 395 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 LIAT1Q6ZQX7 453 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 GGNQ86UU5 652 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 OR10R2Q8NGX6 335 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 NEIL3Q8TAT5 605 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 RNF128Q8TEB7 428 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 ZMYND19Q96E35 227 aaPredicted RBP8.02□□□□□ -1.13
USP53-207ENST00000510852 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 ADGRG7Q96K78 797 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 FOXC2Q99958 501 aa8.02□□□□□ -1.13
USP53-207ENST00000510852 PRRC2CQ9Y520 2896 aaKnown RBP8.02□□□□□ -1.13
USP53-207ENST00000510852 RNF223E7ERA6 249 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 M0R082 166 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 SULT2B1O00204 365 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 WISP2O76076 250 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 TMEM69Q5SWH9 247 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 TEPPQ6URK8 271 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 C8orf86Q6ZUL3 223 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 MCFD2Q8NI22 146 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 ZNF417Q8TAU3 575 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 ASB13Q8WXK3 278 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 SCGB3A2Q96PL1 93 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 ZNF587Q96SQ5 575 aaPredicted RBP8.01□□□□□ -1.13
USP53-207ENST00000510852 SYT3Q9BQG1 590 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 TSSK6Q9BXA6 273 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 SPRR3Q9UBC9 169 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 KLF12Q9Y4X4 402 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 HSD17B6O14756 317 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 PMS2P2O95744 297 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 HLA-DQA2P01906 255 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 PIGFQ07326 219 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 GINS1Q14691 196 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 SPSB3Q6PJ21 355 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 TCTE3Q8IZS6 198 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 FAM24BQ8N5W8 94 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 TMEM99Q8N816 258 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 PITX2Q99697 317 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 GTSF1LQ9H1H1 148 aa8.01□□□□□ -1.13
USP53-207ENST00000510852 OR51I2Q9H344 312 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms