RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 C9orf135Q5VTT2 229 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 FAM90A1Q86YD7 464 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 DTD1Q8TEA8 209 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 OR5B12Q96R08 314 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 UFSP2Q9NUQ7 469 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 TRBV23-1A0A0A0MS06 115 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 WDR1O75083 606 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 GZMBP10144 247 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 GAMTQ14353 236 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 SLC10A1Q14973 349 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 KCNS2Q9ULS6 477 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 ARL2-SNX15V9GYD0 113 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 SDK2Q58EX2 2172 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 C15orf62A8K5M9 175 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 PRSS46E5RG02 174 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 PPP5D1E7EU14 171 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 FNDC10F2Z333 226 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 LAMTOR5O43504 91 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 NXPH2O95156 264 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 ADH4P08319 380 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 FABP4P15090 132 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 RPL15P61313 204 aaKnown RBP7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 ACP7Q6ZNF0 438 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 FAM169BQ8N8A8 192 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 COQ2Q96H96 371 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 HES7Q9BYE0 225 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 CXXC4Q9H2H0 198 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.17
PDGFRA-208ENST00000509490 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 C15orf65H3BRN8 121 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 ATXN7O15265 892 aaPredicted RBP7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 PSPNO60542 156 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 RAMP3O60896 148 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 S1PR2O95136 353 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 IGKV3-15P01624 115 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 HBZP02008 142 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 GYPAP02724 150 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 OPRK1P41145 380 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 OR3A1P47881 315 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 C9orf152Q5JTZ5 239 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 FFAR4Q5NUL3 377 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 BEND4Q6ZU67 534 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 OR2T10Q8NGZ9 312 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 OR1L1Q8NH94 360 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 TMEM204Q9BSN7 226 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 CLCF1Q9UBD9 225 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 FAM166BA8MTA8 275 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 IGHG3P01860 377 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 CFHR2P36980 270 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 ELLP55199 621 aaPredicted RBP7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 TGFBR3Q03167 851 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 PSG7Q13046 419 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 ADIRFQ15847 76 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 KCNIP4Q6PIL6 250 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 MRPL52Q86TS9 123 aaKnown RBP7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 SNX22Q96L94 193 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 FER1L6-AS2Q96M78 137 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 OR2D2Q9H210 308 aa7.71□□□□□ -1.18
PDGFRA-208ENST00000509490 TRGV8A0A0C4DH27 118 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 A0A1W2PNU3 283 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 C17orf98A8MV24 154 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 A8MWP6 167 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 CDIPTO14735 213 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 CD55P08174 381 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 NPPCP23582 126 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 RPP30P78346 268 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 LINC01551Q86U37 167 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 SLC25A40Q8TBP6 338 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 OR2J1Q9GZK6 312 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 SPRR3Q9UBC9 169 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 FREM1Q5H8C1 2179 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 ESDP10768 282 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 G6PCP35575 357 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 VDAC2P45880 294 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 CDC34P49427 236 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 SPCS3P61009 180 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 YPEL3P61236 119 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 MBNL2Q5VZF2 373 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 MYPOPQ86VE0 399 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 ZNF709Q8N972 641 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 OBP2BQ9NPH6 170 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 FOXJ2Q9P0K8 574 aa7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 RBM7Q9Y580 266 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-208ENST00000509490 ESPL1Q14674 2120 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 ZG16O60844 167 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 CD46P15529 392 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 IGHV1-2P23083 117 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 CD1BP29016 333 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 KIR2DS2P43631 304 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 OR8G2PQ6IF36 304 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 Q6ZT83 130 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 H2BFWTQ7Z2G1 175 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 C1orf210Q8IVY1 113 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 TMEM105Q8N8V8 129 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 C11orf52Q96A22 123 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 NDUFAF3Q9BU61 184 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 CLN8Q9UBY8 286 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 JPT1Q9UK76 154 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 TP53TG5Q9Y2B4 290 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 YPEL1O60688 119 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms