RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 IGKV3D-11A0A0A0MRZ8 115 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 IGKV3-11P04433 115 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 LIPFP07098 398 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 ANOS1P23352 680 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 MEOX2P50222 304 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 SLC16A13Q7RTY0 426 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 ZNF502Q8TBZ5 544 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 AQP3Q92482 292 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 RAB24Q969Q5 203 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 RSG1Q9BU20 258 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 BRWD3Q6RI45 1802 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 NRXN2Q9P2S2 1712 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 PLA2G10O15496 165 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 OR2A4O95047 310 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 STAG3L2P0CL84 134 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 COX5BP10606 129 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 NMUP48645 174 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 RND2P52198 227 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 SUCLG1P53597 346 aaKnown RBP6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 GPR146Q96CH1 333 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 OR2A7Q96R45 310 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 A0A1W2PP11 408 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 ZNF729A6NN14 1252 aaPredicted RBP6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 SYNGR3O43761 229 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 FOXH1O75593 365 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 KBTBD11O94819 623 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 S1PR2O95136 353 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 CSRP2Q16527 193 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 PRSS8Q16651 343 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 IBA57Q5T440 356 aaKnown RBP6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 MIC13Q5XKP0 118 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 POM121Q96HA1 1249 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 PGLYRP4Q96LB8 373 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 ELOVL1Q9BW60 279 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 RALYQ9UKM9 306 aaKnown RBP6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 PGPA6NDG6 321 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 MPDU1O75352 247 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 AMY1AP04745 511 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 APOBEC3AP31941 199 aaPredicted RBP6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 SSTR5P35346 364 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 ADIPOQQ15848 244 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 DCAF12L2Q5VW00 463 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 OR9G1Q8NH87 305 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 NUDT3O95989 172 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 CD81P60033 236 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 SERF2P84101 59 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 LSM10Q969L4 123 aaKnown RBP6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 OR4C12Q96R67 309 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 CDC42EP3Q9UKI2 254 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 SMCHD1A6NHR9 2005 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 NPIPB11E5RHQ5 1161 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 TIAF1O95411 115 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 FDCSPQ8NFU4 85 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 TMEM186Q96B77 213 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 MOB4Q9Y3A3 225 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 PHLDA3Q9Y5J5 127 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 IFI6P09912 130 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 SMIM10L1P0DMW3 83 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 HKR1P10072 659 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 SELENOTP62341 195 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 FXYD3Q14802 87 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 DPH3Q96FX2 82 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 SMIM10Q96HG1 83 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 TIMP4Q99727 224 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 QTRT1Q9BXR0 403 aaKnown RBP6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 G6PC2Q9NQR9 355 aa6.15□□□□□ -1.42
SYNPO2-205ENST00000504178 ZNFX1Q9P2E3 1918 aaKnown RBP6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 NDUFB4O95168 129 aa6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 CD99P14209 185 aa6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 RPS20P60866 119 aaKnown RBP6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF383Q8NA42 475 aa6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 VN1R17PQ8TDU5 208 aa6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 OR5P3Q8WZ94 311 aa6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 LRRC37AA6NMS7 1700 aa6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 A8MWL6 223 aa6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 IGHV3-23P01764 117 aa6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 CKS2P33552 79 aa6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 SSBP3Q9BWW4 388 aaPredicted RBP6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 FOXD3Q9UJU5 478 aaPredicted RBP6.15□□□□□ -1.43
SYNPO2-205ENST00000504178 TRBV5-7A0A0A0MS05 114 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 A0A1W2PR77 199 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 A1L4Q6 167 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 GPX1P07203 203 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 ACAA1P09110 424 aaPredicted RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 TSPOP30536 169 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 GLIPR1P48060 266 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 DLX6P56179 175 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM30BQ3MIR4 351 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 PPP1R32Q7Z5V6 425 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 VKORC1L1Q8N0U8 176 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 FGFRL1Q8N441 504 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 NPFFO15130 113 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 ZG16O60844 167 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 LCN2P80188 198 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 CD300CQ08708 224 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 SIGIRRQ6IA17 410 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM45BQ96B21 275 aa6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 SCARF2Q96GP6 870 aaPredicted RBP6.14□□□□□ -1.43
SYNPO2-205ENST00000504178 SIGLEC12Q96PQ1 595 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms