RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 LINC01559Q495D7 138 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 FNDC7Q5VTL7 733 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 PEAR1Q5VY43 1037 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 OTPQ5XKR4 325 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF880Q6PDB4 577 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 LCN15Q6UWW0 184 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 CEACAM20Q6UY09 585 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 Q6ZS52 159 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 IL17RELQ6ZVW7 336 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 APRG1Q8IVJ8 170 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 GPD1LQ8N335 351 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 OR2L13Q8N349 312 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 SPEM1Q8N4L4 309 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 Q8N976 141 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 RNF138Q8WVD3 245 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 BAALCQ8WXS3 180 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 TMEM54Q969K7 222 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 C20orf173Q96LM9 149 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 NSUN5Q96P11 429 aaKnown RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 TM2D2Q9BX73 214 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 MRPL32Q9BYC8 188 aaKnown RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 PRORYQ9H606 182 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 LIN7CQ9NUP9 197 aaKnown RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF581Q9P0T4 197 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 CLCF1Q9UBD9 225 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 LAMP3Q9UQV4 416 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 CCL26Q9Y258 94 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 WASHC3Q9Y3C0 194 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 CSAG2Q9Y5P2 127 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 MYLKQ15746 1914 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 OBSL1O75147 1896 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 KIF26AQ9ULI4 1882 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 ATG2BQ96BY7 2078 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 SAA2-SAA4A0A096LPE2 208 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 A0A0G2JK05 382 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF816-ZNF321PA0A0X1KG74 233 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 A0A1W2PP11 408 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 A0A1W2PPI3 338 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 A0A1W2PS29 197 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 SHISA3A0PJX4 238 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 OR51F1A6NGY5 319 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 A8MT66 165 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 C9JAW5 83 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 FNDC10F2Z333 226 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 RHODO00212 210 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 PRKNO60260 465 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF217O75362 1048 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF682O95780 498 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 OR2H2O95918 312 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 IGFBP2P18065 325 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 RPL7P18124 248 aaKnown RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 PRPH2P23942 346 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 CRYBB3P26998 211 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 COL8A1P27658 744 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 RPL12P30050 165 aaKnown RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 NSG1P42857 185 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 REG1BP48304 166 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 CAMPP49913 170 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 GZMMP51124 257 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 FABP6P51161 128 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 SPEM2Q0P670 501 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 C3AR1Q16581 482 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 SLC25A35Q3KQZ1 300 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF260Q3ZCT1 412 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 RNASE12Q5GAN4 147 aaKnown RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 VAX1Q5SQQ9 334 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 XP32Q5T750 250 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 TXNRD3NBQ6F5E7 133 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 DUX4L9Q6RFH8 374 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 FAM159AQ6UWV7 190 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 Q6ZS92 163 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 Q6ZUT4 128 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 C1QL2Q7Z5L3 287 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 PIP4P1Q86T03 277 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 TMEM219Q86XT9 240 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 TMEM86AQ8N2M4 240 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 KIR3DL3Q8N743 410 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 RBMXL3Q8N7X1 1067 aaKnown RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 SIGLECL1Q8N7X8 197 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 TMEM178AQ8NBL3 297 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 OR10G7Q8NGN6 311 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 OR6K6Q8NGW6 343 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 OR10AG1Q8NH19 301 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 OR1L3Q8NH93 324 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 SLC25A43Q8WUT9 341 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 NUDT8Q8WV74 236 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 TMEM37Q8WXS4 190 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 RBMXL1Q96E39 390 aaKnown RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 S100A16Q96FQ6 103 aaKnown RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 SLC35A4Q96G79 324 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 TMEM101Q96IK0 257 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 FAM234AQ9H0X4 552 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 MTFP1Q9UDX5 166 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 SLC2A6Q9UGQ3 507 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 HIGD1AQ9Y241 93 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 NOP16Q9Y3C1 178 aaKnown RBP5.53□□□□□ -1.52
CLCN3-203ENST00000502998 SPCS1Q9Y6A9 102 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 LINC00312Q9Y6C7 94 aa5.53□□□□□ -1.52
CLCN3-203ENST00000502998 NYNRINQ9P2P1 1898 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms