RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 PIGCQ92535 297 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 CHST6Q9GZX3 395 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 RPS10P5Q9NQ39 176 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 MRPS28Q9Y2Q9 187 aaKnown RBP5.23□□□□□ -1.57
SSBP1-213ENST00000496622 PPIAL4AQ9Y536 164 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 CSMD2Q7Z408 3487 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 PLCE1Q9P212 2302 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 TRAV39A0A0B4J263 110 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 KIR2DL5BA0A0G2JN68 375 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 KIR2DL5BA0A0G2JPC4 375 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 DFFBO76075 338 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 OR5G3P0C626 314 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 SULT1A3P0DMM9 295 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 SULT1A4P0DMN0 295 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 PRSS3P35030 304 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 MTCP1P56278 107 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 TMPRSS3P57727 454 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 SRSF3P84103 164 aaKnown RBP5.22□□□□□ -1.57
SSBP1-213ENST00000496622 BAXQ07812 192 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 CEACAM21Q3KPI0 293 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 PRR30Q53SZ7 412 aaPredicted RBP5.22□□□□□ -1.57
SSBP1-213ENST00000496622 C1orf100Q5SVJ3 147 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 Q6ZVH6 145 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 MOB3CQ70IA8 216 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 TMUB2Q71RG4 321 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 ADGRE4PQ86SQ3 457 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 OR8I2Q8N0Y5 310 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 KIR2DL5AQ8N109 375 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 RBMXL3Q8N7X1 1067 aaKnown RBP5.22□□□□□ -1.57
SSBP1-213ENST00000496622 OR4C16Q8NGL9 310 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 PTH2Q96A98 100 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 ARL6Q9H0F7 186 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 LPAR5Q9H1C0 372 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 AP5S1Q9NUS5 200 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 ELOVL5Q9NYP7 299 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 VPREB3Q9UKI3 123 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 POLQO75417 2590 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 ABCA4P78363 2273 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.22□□□□□ -1.57
SSBP1-213ENST00000496622 TGIF2-C20orf24A0A0A6YYL0 155 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 F8VVB4 439 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 F8VWA3 439 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 IGLV3-1P01715 115 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 OR13C7P0DN81 318 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM225BP0DP42 221 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 PSG1P11464 419 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 EDN2P20800 178 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 IGHV1-2P23083 117 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 IGFL2Q6UWQ7 119 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 WDR82Q6UXN9 313 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 SEM1Q6ZVN7 128 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 MDP1Q86V88 176 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 PNLDC1Q8NA58 520 aaKnown RBP5.22□□□□□ -1.57
SSBP1-213ENST00000496622 OR1S2Q8NGQ3 325 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 FAM168AQ92567 244 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 ARHGAP5-AS1Q96IT6 56 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 S100A13Q99584 98 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 HDHD3Q9BSH5 251 aaPredicted RBP5.22□□□□□ -1.57
SSBP1-213ENST00000496622 RSG1Q9BU20 258 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 OR10A2Q9H208 303 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 MTFP1Q9UDX5 166 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF391Q9UJN7 358 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 FZR1Q9UM11 496 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 ETV7Q9Y603 341 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 COX11Q9Y6N1 276 aa5.22□□□□□ -1.57
SSBP1-213ENST00000496622 IGKV1-12A0A0C4DH73 117 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF850A8MQ14 1090 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 G3V4G9 280 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 PYCARD-AS1I3L0S3 204 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 PSPNO60542 156 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 IGKV1D-12P01611 117 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 CCL1P22362 96 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 KIR2DL2P43627 348 aaPredicted RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 RPS10P46783 165 aaKnown RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 NPBWR2P48146 333 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 RPS27AP62979 156 aaKnown RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 PIGYQ3MUY2 71 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 C6orf201Q7Z4U5 140 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 ZADH2Q8N4Q0 377 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 CISD2Q8N5K1 135 aaKnown RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 STPG4Q8N801 248 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 OR52L2PQ8NGH6 319 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 RNASEH2CQ8TDP1 164 aaKnown RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 SYT3Q9BQG1 590 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 MCRIP2Q9BUT9 160 aaKnown RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 GTSF1LQ9H1H1 148 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 TUBA4BQ9H853 241 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 MOB1AQ9H8S9 216 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 SLC2A8Q9NY64 477 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 IL36RNQ9UBH0 155 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 JPT1Q9UK76 154 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 RNF114Q9Y508 228 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 AKAP6Q13023 2319 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 DIDO1Q9BTC0 2240 aaKnown RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 IGHV2OR16-5A0A0B4J2B6 119 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 HSPB6O14558 160 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 GSTZ1O43708 216 aaPredicted RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 S1PR2O95136 353 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 CDS2O95674 445 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms