RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ZBED9Q6R2W3 1325 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 IGKV2-24A0A0C4DH68 120 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 A8MWP4 228 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 TMEM238C9JI98 176 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 E5RI56 91 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 C8orf87E5RJ46 101 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 C15orf65H3BRN8 121 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 PDYNP01213 254 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 IGHV3-53P01767 116 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 CGB3P0DN86 165 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 CGB7P0DN87 165 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 KLF3P57682 345 aaPredicted RBP2.98□□□□□ -1.93
CCDC39-207ENST00000495817 RAB8AP61006 207 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 PAFAH1B3Q15102 231 aaKnown RBP2.98□□□□□ -1.93
CCDC39-207ENST00000495817 MMDQ15546 238 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 IMPG1Q17R60 797 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 PDZD11Q5EBL8 140 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 ZNF660Q6AZW8 331 aaPredicted RBP2.98□□□□□ -1.93
CCDC39-207ENST00000495817 ADM2Q7Z4H4 148 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 MUC15Q8N387 334 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 BPIFB6Q8NFQ5 453 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 OR8K1Q8NGG5 319 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 DGCR14Q96DF8 476 aaKnown RBP2.98□□□□□ -1.93
CCDC39-207ENST00000495817 CMTM5Q96DZ9 223 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 UGT2B28Q9BY64 529 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 GABARAPL1Q9H0R8 117 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 OR51E2Q9H255 320 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 FBXL3Q9UKT7 428 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 HTTP42858 3142 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 TONSLQ96HA7 1378 aa2.98□□□□□ -1.93
CCDC39-207ENST00000495817 BRCA2P51587 3418 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 MKI67P46013 3256 aaKnown RBP2.97□□□□□ -1.93
CCDC39-207ENST00000495817 FUOMA2VDF0 154 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 ARGFXA6NJG6 315 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 EFCAB9A8MZ26 197 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 C9J4A7 227 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 D6RAR5 112 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 FGF16O43320 207 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 DEXIO95424 95 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 RAB36O95755 333 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 EPPINO95925 133 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 IGKV1D-33P01593 117 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 IGKV1-33P01594 117 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 OR4E1P0C645 316 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 PET100P0DJ07 73 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 RPL14P50914 215 aaKnown RBP2.97□□□□□ -1.93
CCDC39-207ENST00000495817 STC1P52823 247 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 ERVS71-1P61550 626 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 ZCWPW2Q504Y3 356 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 ELP2Q6IA86 826 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 S100A7AQ86SG5 101 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 TAC4Q86UU9 113 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 MAL2Q969L2 176 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 CMBLQ96DG6 245 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 CEP19Q96LK0 163 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 DCUN1D5Q9BTE7 237 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 ZNF426Q9BUY5 554 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 FBXL15Q9H469 300 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 BTRCQ9Y297 605 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 MYH10P35580 1976 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 NID2Q14112 1375 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 BCORQ6W2J9 1755 aa2.97□□□□□ -1.93
CCDC39-207ENST00000495817 FER1L6Q2WGJ9 1857 aa2.96□□□□□ -1.93
CCDC39-207ENST00000495817 A0A1W2PQL4 384 aaPredicted RBP2.96□□□□□ -1.94
CCDC39-207ENST00000495817 MPZL2O60487 215 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 PSMG1O95456 288 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 GPR75O95800 540 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 HMGN1P05114 100 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 HRES1P13985 223 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 GABRA1P14867 456 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 TGFBR2P37173 567 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 INPP1P49441 399 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 NKX2-5P52952 324 aaPredicted RBP2.96□□□□□ -1.94
CCDC39-207ENST00000495817 FOXA1P55317 472 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 FAM3AP98173 230 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 ZNHIT3Q15649 155 aaPredicted RBP2.96□□□□□ -1.94
CCDC39-207ENST00000495817 AMMECR1LQ6DCA0 310 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 LAIR2Q6ISS4 152 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 HS3ST5Q8IZT8 346 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 ATP6V1C2Q8NEY4 427 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 REEP6Q96HR9 211 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 TMEM56Q96MV1 263 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 TM2D3Q9BRN9 247 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 BCL2L14Q9BZR8 327 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 FAM107BQ9H098 131 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 ABCG5Q9H222 651 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 HRASLSQ9HDD0 168 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 ASF1BQ9NVP2 202 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 DMAC2Q9NW81 257 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 CACNA1SQ13698 1873 aa2.96□□□□□ -1.94
CCDC39-207ENST00000495817 UBR2Q8IWV8 1755 aa2.95□□□□□ -1.94
CCDC39-207ENST00000495817 SCN11AQ9UI33 1791 aa2.95□□□□□ -1.94
CCDC39-207ENST00000495817 ARFGEF2Q9Y6D5 1785 aa2.95□□□□□ -1.94
CCDC39-207ENST00000495817 SHROOM3Q8TF72 1996 aa2.95□□□□□ -1.94
CCDC39-207ENST00000495817 OR5H14A6NHG9 310 aa2.95□□□□□ -1.94
CCDC39-207ENST00000495817 GOLGA6L10A6NI86 522 aa2.95□□□□□ -1.94
CCDC39-207ENST00000495817 J3QLI3 93 aa2.95□□□□□ -1.94
CCDC39-207ENST00000495817 ASS1P00966 412 aaKnown RBP2.95□□□□□ -1.94
CCDC39-207ENST00000495817 IFNA5P01569 189 aa2.95□□□□□ -1.94
CCDC39-207ENST00000495817 RCVRNP35243 200 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms