RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 RFPL4AL1F8VTS6 287 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 TOX3O15405 576 aaPredicted RBP1.03□□□□□ -2.24
VPS50-219ENST00000495039 NDUFB2O95178 105 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 BPGMP07738 259 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 UCHL1P09936 223 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 CD24P25063 80 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 MAGEA12P43365 314 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 DRAM2Q6UX65 266 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 SPATA24Q86W54 205 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 COA5Q86WW8 74 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 LRRC34Q8IZ02 419 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 LFNGQ8NES3 379 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 SPACA4Q8TDM5 124 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 Q8WTZ3 238 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 PPCDCQ96CD2 204 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 MS4A6EQ96DS6 147 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 CPNE2Q96FN4 548 aaPredicted RBP1.03□□□□□ -2.24
VPS50-219ENST00000495039 NAA38Q9BRA0 125 aaKnown RBP1.03□□□□□ -2.24
VPS50-219ENST00000495039 MROQ9BYG7 248 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 BABAM2Q9NXR7 383 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 HHLA3Q9XRX5 114 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 HDGFL3Q9Y3E1 203 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 RIMS2Q9UQ26 1411 aa1.03□□□□□ -2.24
VPS50-219ENST00000495039 SCN9AQ15858 1988 aa1.03□□□□□ -2.25
VPS50-219ENST00000495039 DSCAMO60469 2012 aa1.03□□□□□ -2.25
VPS50-219ENST00000495039 HELZ2Q9BYK8 2649 aaKnown RBP1.02□□□□□ -2.25
VPS50-219ENST00000495039 TMSB15BA0A087X1C1 80 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 TMEM213A2RRL7 107 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 FTCDNL1E5RQL4 147 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 M0R381 172 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 CCRL2O00421 344 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 BHLHE40O14503 412 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 TXNDC9O14530 226 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 STX10O60499 249 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 SCN2BO60939 215 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 ADAP1O75689 374 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 NAPSAO96009 420 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 ORM1P02763 201 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 ANGP03950 147 aaKnown RBP1.02□□□□□ -2.25
VPS50-219ENST00000495039 ATP5G1P05496 136 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 PET100P0DJ07 73 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 CTBP2P56545 445 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 TMEM258P61165 79 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 GRIN2BQ13224 1484 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 HLA-DRB5Q30154 266 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 LRRC28Q86X40 367 aaPredicted RBP1.02□□□□□ -2.25
VPS50-219ENST00000495039 C1orf174Q8IYL3 243 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 DAND5Q8N907 189 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 OR5L1Q8NGL2 311 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 CLDND2Q8NHS1 167 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 NDEL1Q9GZM8 345 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 CHMP4BQ9H444 224 aaKnown RBP1.02□□□□□ -2.25
VPS50-219ENST00000495039 REREQ9P2R6 1566 aa1.02□□□□□ -2.25
VPS50-219ENST00000495039 CHD5Q8TDI0 1954 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 LAMB2P55268 1798 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 DISP1Q96F81 1524 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 FAM25EA8MYX2 175 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 AZIN1O14977 448 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 NEMFO60524 1076 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 NDUFS6O75380 124 aaKnown RBP1.01□□□□□ -2.25
VPS50-219ENST00000495039 NPYP01303 97 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 MIPP30301 263 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 RPL27AP46776 148 aaKnown RBP1.01□□□□□ -2.25
VPS50-219ENST00000495039 GABRA2P47869 451 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 IDH3GP51553 393 aaPredicted RBP1.01□□□□□ -2.25
VPS50-219ENST00000495039 TMEM33P57088 247 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 HPCAP84074 193 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 GLO1Q04760 184 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 SLC38A11Q08AI6 406 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 C4orf26Q17RF5 130 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 SPATA12Q7Z6I5 190 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 OR8B12Q8NGG6 310 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 OR10D3Q8NH80 312 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 SMCR5Q8TEV8 140 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 TAAR3PQ9P1P4 343 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 SDK1Q7Z5N4 2213 aa1.01□□□□□ -2.25
VPS50-219ENST00000495039 DICER1Q9UPY3 1922 aaKnown RBP1.01□□□□□ -2.25
VPS50-219ENST00000495039 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
VPS50-219ENST00000495039 MED13Q9UHV7 2174 aa1□□□□□ -2.25
VPS50-219ENST00000495039 A0A1W2PP64 1363 aa1□□□□□ -2.25
VPS50-219ENST00000495039 RBM11P57052 281 aaKnown RBP1□□□□□ -2.25
VPS50-219ENST00000495039 SNAP25P60880 206 aa1□□□□□ -2.25
VPS50-219ENST00000495039 GNA13Q14344 377 aa1□□□□□ -2.25
VPS50-219ENST00000495039 LRRC26Q2I0M4 334 aa1□□□□□ -2.25
VPS50-219ENST00000495039 FAM201AQ5SY85 155 aa1□□□□□ -2.25
VPS50-219ENST00000495039 CFAP53Q96M91 514 aa1□□□□□ -2.25
VPS50-219ENST00000495039 NMNAT3Q96T66 252 aa1□□□□□ -2.25
VPS50-219ENST00000495039 TIPINQ9BVW5 301 aa1□□□□□ -2.25
VPS50-219ENST00000495039 BBS2Q9BXC9 721 aa1□□□□□ -2.25
VPS50-219ENST00000495039 TMEM222Q9H0R3 208 aa1□□□□□ -2.25
VPS50-219ENST00000495039 NRBP2Q9NSY0 501 aa1□□□□□ -2.25
VPS50-219ENST00000495039 TP53TG1Q9Y2A0 90 aa1□□□□□ -2.25
VPS50-219ENST00000495039 POLR3HQ9Y535 204 aaPredicted RBP1□□□□□ -2.25
VPS50-219ENST00000495039 PCYT1BQ9Y5K3 369 aaPredicted RBP1□□□□□ -2.25
VPS50-219ENST00000495039 IGHV3-64A0A075B6Q5 118 aa0.99□□□□□ -2.25
VPS50-219ENST00000495039 OR6C6A6NF89 314 aa0.99□□□□□ -2.25
VPS50-219ENST00000495039 A8MUN3 132 aa0.99□□□□□ -2.25
VPS50-219ENST00000495039 ZNF705FA8MVS1 300 aaPredicted RBP0.99□□□□□ -2.25
VPS50-219ENST00000495039 MT-CO2P00403 227 aa0.99□□□□□ -2.25
VPS50-219ENST00000495039 CXCL2P19875 107 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms