RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ZBTB8BQ8NAP8 495 aaPredicted RBP10.56□□□□□ -0.72
ERCC3-209ENST00000494464 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
ERCC3-209ENST00000494464 AKR1E2Q96JD6 320 aa10.56□□□□□ -0.72
ERCC3-209ENST00000494464 HYLS1Q96M11 299 aa10.56□□□□□ -0.72
ERCC3-209ENST00000494464 ZNF436Q9C0F3 470 aaPredicted RBP10.56□□□□□ -0.72
ERCC3-209ENST00000494464 EHFQ9NZC4 300 aa10.56□□□□□ -0.72
ERCC3-209ENST00000494464 MGAT4CQ9UBM8 478 aa10.56□□□□□ -0.72
ERCC3-209ENST00000494464 VWFP04275 2813 aa10.56□□□□□ -0.72
ERCC3-209ENST00000494464 GZMHP20718 246 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 ARPC4P59998 168 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 RBM39Q14498 530 aaKnown RBP10.55□□□□□ -0.72
ERCC3-209ENST00000494464 HABP2Q14520 560 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-209ENST00000494464 TMED4Q7Z7H5 227 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 GAPTQ8N292 157 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 OR2AK2Q8NG84 335 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 OR52B4Q8NGK2 314 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 OR52M1Q8NGK5 317 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 NEK7Q8TDX7 302 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 TOMM40LQ969M1 308 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 HDHD3Q9BSH5 251 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-209ENST00000494464 WNT10AQ9GZT5 417 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 ZNF230Q9UIE0 474 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-209ENST00000494464 PSG11Q9UQ72 335 aa10.55□□□□□ -0.72
ERCC3-209ENST00000494464 WNK1Q9H4A3 2382 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 IGKV1D-8A0A087WSZ0 117 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 C15orf65H3BRN8 121 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 FABP7O15540 132 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 OR2F2O95006 317 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 OR2A4O95047 310 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 ZBTB25P24278 435 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 RAP2BP61225 183 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 TSPAN5P62079 268 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 Q3ZCU0 254 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 AADACL3Q5VUY0 350 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 LPCAT3Q6P1A2 487 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 LYG2Q86SG7 212 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 C8orf31Q8N9H6 132 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 ZFAND1Q8TCF1 268 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 CAPSLQ8WWF8 208 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 RPEQ96AT9 228 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 OR2A7Q96R45 310 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 SLC25A33Q9BSK2 321 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 RIMS4Q9H426 269 aaPredicted RBP10.54□□□□□ -0.72
ERCC3-209ENST00000494464 NECAP2Q9NVZ3 263 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 GPR132Q9UNW8 380 aa10.54□□□□□ -0.72
ERCC3-209ENST00000494464 TRBV6-6A0A0A6YYG2 114 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 TRAV39A0A0B4J263 110 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 A0A1W2PPI3 338 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 FAM90A9PA6NNJ1 464 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 MCRIP1C9JLW8 97 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 NAPSAO96009 420 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 HLA-AP01891 365 aaKnown RBP10.53□□□□□ -0.72
ERCC3-209ENST00000494464 VDAC2P45880 294 aaPredicted RBP10.53□□□□□ -0.72
ERCC3-209ENST00000494464 GNG10P50151 68 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 RAB7AP51149 207 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 BLCAPP62952 87 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 DHODHQ02127 395 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 DHRS2Q13268 280 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 LTC4SQ16873 150 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 TMEM30BQ3MIR4 351 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 ZNF660Q6AZW8 331 aaPredicted RBP10.53□□□□□ -0.72
ERCC3-209ENST00000494464 Q6ZS46 218 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 THNSL2Q86YJ6 484 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 OR8H3Q8N146 312 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 C12orf45Q8N5I9 185 aaPredicted RBP10.53□□□□□ -0.72
ERCC3-209ENST00000494464 RFESDQ8TAC1 157 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 MAFIPQ8WZ33 124 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 LEAP2Q969E1 77 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 ARL11Q969Q4 196 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 RBM14Q96PK6 669 aaKnown RBP10.53□□□□□ -0.72
ERCC3-209ENST00000494464 RAB9BQ9NP90 201 aa10.53□□□□□ -0.72
ERCC3-209ENST00000494464 M0QZK8 103 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 FBXO24O75426 580 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 CD24P25063 80 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 LOXL3P58215 753 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 ZNF816Q0VGE8 651 aaPredicted RBP10.52□□□□□ -0.72
ERCC3-209ENST00000494464 PPP1R1AQ13522 171 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 FBLN7Q53RD9 439 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 ARSJQ5FYB0 599 aaPredicted RBP10.52□□□□□ -0.72
ERCC3-209ENST00000494464 C6orf183Q5T699 404 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 TRAT1Q6PIZ9 186 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 LINC00311Q8N616 119 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 OR10X1Q8NGY0 326 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 MITD1Q8WV92 249 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 C5orf66Q9H5L9 145 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 GFOD1Q9NXC2 390 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 PIPOXQ9P0Z9 390 aa10.52□□□□□ -0.72
ERCC3-209ENST00000494464 C9orf170A2RU37 121 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 OR5H14A6NHG9 310 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 C12orf77C9JDV5 145 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 SMLR1H3BR10 107 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 SDCBPO00560 298 aaPredicted RBP10.52□□□□□ -0.73
ERCC3-209ENST00000494464 RGS13O14921 159 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 WIPF1O43516 503 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 RGS11O94810 467 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 DUS4LO95620 317 aaKnown RBP10.52□□□□□ -0.73
ERCC3-209ENST00000494464 IGHV3-7P01780 117 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 AMY1AP04745 511 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 GSTT2P0CG29 244 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms