RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 RBFOX3A6NFN3 312 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
RPL13A-212ENST00000488946 PPBPP02775 128 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 SCTP09683 121 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 KITLGP21583 273 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
RPL13A-212ENST00000488946 GLIPR1P48060 266 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 ASCL1P50553 236 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 UBE2KP61086 200 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 RND3P61587 244 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 CCL20P78556 96 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 DLK1P80370 383 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 EWSR1Q01844 656 aaKnown RBP eCLIP11.95□□□□□ -0.5
RPL13A-212ENST00000488946 ZNF705AQ6ZN79 300 aaPredicted RBP11.95□□□□□ -0.5
RPL13A-212ENST00000488946 INTS1Q8N201 2190 aaKnown RBP11.95□□□□□ -0.5
RPL13A-212ENST00000488946 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
RPL13A-212ENST00000488946 IGHV1-18A0A0C4DH31 117 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 IGKV1-6A0A0C4DH72 117 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 HSPB6O14558 160 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 ZNF146Q15072 292 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 SPSB3Q6PJ21 355 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 C1orf174Q8IYL3 243 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 GAPTQ8N292 157 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 OR8G5Q8NG78 346 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 OR4D5Q8NGN0 318 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 CABLES2Q9BTV7 478 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 MSL2Q9HCI7 577 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 POLR3KQ9Y2Y1 108 aaPredicted RBP11.95□□□□□ -0.5
RPL13A-212ENST00000488946 SLC25A15Q9Y619 301 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 RFNGQ9Y644 331 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 LOC400499M0QZD8 3231 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 ITPR1Q14643 2758 aa11.95□□□□□ -0.5
RPL13A-212ENST00000488946 IGHV2OR16-5A0A0B4J2B6 119 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 MLNRO43193 412 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 TIMP3P35625 211 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 HLA-DRB3P79483 266 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 GNMTQ14749 295 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 COA6Q5JTJ3 125 aaKnown RBP11.94□□□□□ -0.5
RPL13A-212ENST00000488946 VHLLQ6RSH7 139 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 OR11L1Q8NGX0 322 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 OR2G3Q8NGZ4 309 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 RDH5Q92781 318 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 ELOVL1Q9BW60 279 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 HES4Q9HCC6 221 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 MGAQ8IWI9 3026 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 DEGS1O15121 323 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 ATP6V0CP27449 155 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 PTTG1IPP53801 180 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 KLF3P57682 345 aaPredicted RBP11.94□□□□□ -0.5
RPL13A-212ENST00000488946 ZNF266Q14584 549 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 TBR1Q16650 682 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 SPIN3Q5JUX0 258 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 MBNL2Q5VZF2 373 aaKnown RBP11.94□□□□□ -0.5
RPL13A-212ENST00000488946 C20orf204Q6ZNR8 217 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 MOB1BQ7L9L4 216 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 C1orf87Q8N0U7 546 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 WFIKKN1Q96NZ8 548 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 ABHD14AQ9BUJ0 271 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 C11orf1Q9H5F2 150 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 VAX2Q9UIW0 290 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 SH3BGRL2Q9UJC5 107 aa11.94□□□□□ -0.5
RPL13A-212ENST00000488946 GTF3C1Q12789 2109 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.93□□□□□ -0.5
RPL13A-212ENST00000488946 C20orf202A1L168 122 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 FAM24AA6NFZ4 105 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 NPIPB11E5RHQ5 1161 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 C3orf80F5H4A9 247 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 H0YL77 283 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 HSD17B6O14756 317 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 PHF1O43189 567 aaPredicted RBP11.93□□□□□ -0.5
RPL13A-212ENST00000488946 SRP19P09132 144 aaKnown RBP11.93□□□□□ -0.5
RPL13A-212ENST00000488946 GNRHRP30968 328 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 KRTCAP3Q53RY4 240 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 PCSK4Q6UW60 755 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 KIAA1456Q9P272 454 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 CFAP47Q6ZTR5 3102 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 TMEM238C9JI98 176 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 SLC33A1O00400 549 aaPredicted RBP11.93□□□□□ -0.5
RPL13A-212ENST00000488946 CDIPTO14735 213 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 HS3ST1O14792 307 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 CCL25O15444 150 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 OR2H2O95918 312 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 ZNF324BQ6AW86 544 aaPredicted RBP11.93□□□□□ -0.5
RPL13A-212ENST00000488946 CXXC4Q9H2H0 198 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 RPH3ALQ9UNE2 315 aa11.93□□□□□ -0.5
RPL13A-212ENST00000488946 MPPED1O15442 326 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 PITX3O75364 302 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 RAB7AP51149 207 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 SRPXP78539 464 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 RNF151Q2KHN1 245 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 C3orf36Q3SXR2 165 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 ZNF474Q6S9Z5 364 aaPredicted RBP11.92□□□□□ -0.5
RPL13A-212ENST00000488946 ZNF497Q6ZNH5 498 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 C11orf53Q8IXP5 236 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 RPRMLQ8N4K4 120 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 TP53RKQ96S44 253 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 IGKV1D-13A0A0B4J2D9 117 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 IGSF23A1L1A6 192 aa11.92□□□□□ -0.5
RPL13A-212ENST00000488946 IGKV1-13P0DP09 117 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms