RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TUSC1Q2TAM9 212 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 EIF5AL1Q6IS14 154 aaKnown RBP15.89■□□□□ 0.13
CCM2-216ENST00000488727 TBC1D26Q86UD7 250 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 FAM219AQ8IW50 185 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 FOXRED2Q8IWF2 684 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 LY6G5BQ8NDX9 201 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 OR4D5Q8NGN0 318 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 C8orf46Q8TAG6 207 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 PPP1R35Q8TAP8 253 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 COQ2Q96H96 371 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 TAS2R3Q9NYW6 316 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 INSIG2Q9Y5U4 225 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 IGKV1D-13A0A0B4J2D9 117 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 SCO1O75880 301 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 FAM157CP0CG43 387 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 IGKV1-13P0DP09 117 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 AESQ08117 197 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 TMEM268Q5VZI3 342 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 ZNF818PQ6ZRF7 136 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 SLC35G3Q8N808 338 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 OR1S2Q8NGQ3 325 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 PLPPR1Q8TBJ4 325 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 SECTM1Q8WVN6 248 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 TMED6Q8WW62 240 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 MARC2Q969Z3 335 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 MEX3AA1L020 520 aaKnown RBP15.88■□□□□ 0.13
CCM2-216ENST00000488727 ENSAO43768 121 aaKnown RBP15.88■□□□□ 0.13
CCM2-216ENST00000488727 SCGB1D2O95969 90 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 RPL31P62899 125 aaKnown RBP15.88■□□□□ 0.13
CCM2-216ENST00000488727 GPR157Q5UAW9 335 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 RPL7L1Q6DKI1 246 aaKnown RBP15.88■□□□□ 0.13
CCM2-216ENST00000488727 Q71RC1 249 aaPredicted RBP15.88■□□□□ 0.13
CCM2-216ENST00000488727 H1FOOQ8IZA3 346 aaPredicted RBP15.88■□□□□ 0.13
CCM2-216ENST00000488727 ABHD14BQ96IU4 210 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 SPIN2AQ99865 258 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 SPIN2BQ9BPZ2 258 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 ZC4H2Q9NQZ6 224 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 FBXL17Q9UF56 701 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 POMT1Q9Y6A1 747 aa15.88■□□□□ 0.13
CCM2-216ENST00000488727 TRBV23-1A0A0A0MS06 115 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 GPR137BO60478 399 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 PPIAL4GP0DN37 164 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 UCP1P25874 307 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 P2RY1P47900 373 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 GLIPR1P48060 266 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 TCF23Q7RTU1 214 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 C5orf24Q7Z6I8 188 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 IL22RA2Q969J5 263 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 SAT2Q96F10 170 aaPredicted RBP15.87■□□□□ 0.13
CCM2-216ENST00000488727 YAE1D1Q9NRH1 226 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 KCNS2Q9ULS6 477 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 UBE2J1Q9Y385 318 aaPredicted RBP15.87■□□□□ 0.13
CCM2-216ENST00000488727 KIAA2026Q5HYC2 2103 aa15.87■□□□□ 0.13
CCM2-216ENST00000488727 ST8SIA3O43173 380 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 JTBO76095 146 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 TMEM200BQ69YZ2 307 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 ZNF497Q6ZNH5 498 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 SELENOHQ8IZQ5 122 aaKnown RBP15.86■□□□□ 0.13
CCM2-216ENST00000488727 OR52M1Q8NGK5 317 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 KIRREL1Q96J84 757 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 TAF9BQ9HBM6 251 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 OR2S2Q9NQN1 319 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 LPAR3Q9UBY5 353 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 OR2W1Q9Y3N9 320 aa15.86■□□□□ 0.13
CCM2-216ENST00000488727 SONP18583 2426 aaKnown RBP15.86■□□□□ 0.13
CCM2-216ENST00000488727 H0Y980 276 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 AVPP01185 164 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 GATA3P23771 443 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 PAX5Q02548 391 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 PAX8Q06710 450 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 ZNF273Q14593 569 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 KRBOX4Q5JUW0 171 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 BTNL3Q6UXE8 466 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 CMTM1Q8IZ96 169 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 OR10J5Q8NHC4 309 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 ARL11Q969Q4 196 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 ARV1Q9H2C2 271 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 CCL28Q9NRJ3 127 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 TEP1Q99973 2627 aaKnown RBP15.85■□□□□ 0.13
CCM2-216ENST00000488727 PIGBOS1A0A0B4J2F0 54 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 LIPFP07098 398 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 C1orf229Q6ZS94 237 aaPredicted RBP15.85■□□□□ 0.13
CCM2-216ENST00000488727 ZNF695Q8IW36 515 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 UBAC2Q8NBM4 344 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 SMIM8Q96KF7 97 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 C11orf1Q9H5F2 150 aa15.85■□□□□ 0.13
CCM2-216ENST00000488727 TMA7Q9Y2S6 64 aaKnown RBP15.85■□□□□ 0.13
CCM2-216ENST00000488727 RCC1P18754 421 aaPredicted RBP15.84■□□□□ 0.13
CCM2-216ENST00000488727 S100GP29377 79 aa15.84■□□□□ 0.13
CCM2-216ENST00000488727 ARF6P62330 175 aa15.84■□□□□ 0.13
CCM2-216ENST00000488727 IL34Q6ZMJ4 242 aa15.84■□□□□ 0.13
CCM2-216ENST00000488727 DMBX1Q8NFW5 382 aa15.84■□□□□ 0.13
CCM2-216ENST00000488727 C7orf69Q9H7B7 122 aa15.84■□□□□ 0.13
CCM2-216ENST00000488727 MBNL3Q9NUK0 354 aaKnown RBP15.84■□□□□ 0.13
CCM2-216ENST00000488727 RCL1Q9Y2P8 373 aaKnown RBP15.84■□□□□ 0.13
CCM2-216ENST00000488727 ODAMA1E959 279 aa15.83■□□□□ 0.13
CCM2-216ENST00000488727 HSD17B6O14756 317 aa15.83■□□□□ 0.13
CCM2-216ENST00000488727 CCL3L1P16619 93 aa15.83■□□□□ 0.13
CCM2-216ENST00000488727 HIVEP2P31629 2446 aa15.83■□□□□ 0.13
CCM2-216ENST00000488727 SULT1A2P50226 295 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms