RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 AMMECR1Q9Y4X0 333 aaPredicted RBP1.15□□□□□ -2.23
CD46-215ENST00000488596 DENND4BO75064 1496 aaPredicted RBP1.15□□□□□ -2.23
CD46-215ENST00000488596 NYNRINQ9P2P1 1898 aaKnown RBP1.15□□□□□ -2.23
CD46-215ENST00000488596 A0A1W2PP64 1363 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 IGHV3-15A0A0B4J1V0 119 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 A0A1B0GVG6 124 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 TINCRA0A1B0GVN0 87 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 ARRDC5A6NEK1 342 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 TMEM235A6NFC5 223 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 J3QQQ9 107 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 COCHO43405 550 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 STX10O60499 249 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 IGHV1-69P01742 117 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 IL6P05231 212 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 BPGMP07738 259 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 CASQ1P31415 396 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 XCL1P47992 114 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 RPL14P50914 215 aaKnown RBP1.14□□□□□ -2.23
CD46-215ENST00000488596 TMEM33P57088 247 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 RPL26P61254 145 aaKnown RBP1.14□□□□□ -2.23
CD46-215ENST00000488596 GNA13Q14344 377 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 SDHAF4Q5VUM1 108 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 DNM1P34Q6PK57 102 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 SPATA12Q7Z6I5 190 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 CD302Q8IX05 232 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 OR2D3Q8NGH3 330 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 MRPS24Q96EL2 167 aaKnown RBP1.14□□□□□ -2.23
CD46-215ENST00000488596 NMNAT3Q96T66 252 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 RPL26L1Q9UNX3 145 aaKnown RBP1.14□□□□□ -2.23
CD46-215ENST00000488596 PCYT1BQ9Y5K3 369 aaPredicted RBP1.14□□□□□ -2.23
CD46-215ENST00000488596 RTEL1-TNFRSF6BF6WH68 1400 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 RAD50Q92878 1312 aa1.14□□□□□ -2.23
CD46-215ENST00000488596 COL4A1P02462 1669 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 IGLV3-9A0A075B6K5 115 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 RFPL4AA6NLU0 287 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 RFPL4AL1F8VTS6 287 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 BIRC5O15392 142 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 HPGDSO60760 199 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 OCMP0CE72 109 aaPredicted RBP1.13□□□□□ -2.23
CD46-215ENST00000488596 ZNF728P0DKX0 622 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 UGT2B7P16662 529 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 CD40LGP29965 261 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 IFNGR2P38484 337 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 CD151P48509 253 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 TAS2R30P59541 319 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 BTN3A2P78410 334 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 SAPCD1Q5SSQ6 148 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 FAM19A5Q7Z5A7 132 aaPredicted RBP1.13□□□□□ -2.23
CD46-215ENST00000488596 EEF1AKMT1Q8WVE0 214 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 ASB13Q8WXK3 278 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 SLC35G5Q96KT7 338 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 TMEM109Q9BVC6 243 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 TIMM21Q9BVV7 248 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 TTTY13Q9BZ97 58 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 SLC22A4Q9H015 551 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 IMP3Q9NV31 184 aaKnown RBP1.13□□□□□ -2.23
CD46-215ENST00000488596 NDUFB11Q9NX14 153 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 NAV1Q8NEY1 1877 aa1.13□□□□□ -2.23
CD46-215ENST00000488596 SORL1Q92673 2214 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 C2orf74A8MZ97 194 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 F5H768 121 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 PRB1P04280 392 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 FABP5Q01469 135 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 ZNF90Q03938 601 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 UAP1Q16222 522 aaPredicted RBP1.12□□□□□ -2.23
CD46-215ENST00000488596 Q6ZS52 159 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 NAA40Q86UY6 237 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 LHFPL1Q86WI0 220 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 SPACA4Q8TDM5 124 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 NKX6-2Q9C056 277 aaPredicted RBP1.12□□□□□ -2.23
CD46-215ENST00000488596 DERL2Q9GZP9 239 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 PRO2289Q9P1D8 64 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 POLR3HQ9Y535 204 aaPredicted RBP1.12□□□□□ -2.23
CD46-215ENST00000488596 RGS12O14924 1447 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 SCN9AQ15858 1988 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 ICE1Q9Y2F5 2266 aa1.12□□□□□ -2.23
CD46-215ENST00000488596 FBN3Q75N90 2809 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 CACNA1GO43497 2377 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 TMED7-TICAM2A0A0A6YYA0 188 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 A0A1W2PQD3 144 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 TXNDC9O14530 226 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 HLA-DQB2P05538 268 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 HIST1H1CP16403 213 aaKnown RBP1.11□□□□□ -2.23
CD46-215ENST00000488596 RAP1GDS1P52306 607 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 CXCR4P61073 352 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 HLA-DRB3P79483 266 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 ERHP84090 104 aaKnown RBP1.11□□□□□ -2.23
CD46-215ENST00000488596 GNA12Q03113 381 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 DMTNQ08495 405 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 JOSD1Q15040 202 aaPredicted RBP1.11□□□□□ -2.23
CD46-215ENST00000488596 LGALS9BQ3B8N2 356 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 PDPK2PQ6A1A2 396 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 PLEKHG7Q6ZR37 379 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 SLC35E3Q7Z769 313 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 CLDND2Q8NHS1 167 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 C12orf43Q96C57 262 aaKnown RBP1.11□□□□□ -2.23
CD46-215ENST00000488596 MS4A6EQ96DS6 147 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 SMIM19Q96E16 107 aa1.11□□□□□ -2.23
CD46-215ENST00000488596 CPNE2Q96FN4 548 aaPredicted RBP1.11□□□□□ -2.23
CD46-215ENST00000488596 SFRP2Q96HF1 295 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms