RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 SPDEFO95238 335 aa12.04□□□□□ -0.48
TOM1-214ENST00000487670 IGFBP3P17936 291 aaPredicted RBP12.04□□□□□ -0.48
TOM1-214ENST00000487670 MC5RP33032 325 aa12.04□□□□□ -0.48
TOM1-214ENST00000487670 ZNF575Q86XF7 245 aa12.04□□□□□ -0.48
TOM1-214ENST00000487670 GALMQ96C23 342 aa12.04□□□□□ -0.48
TOM1-214ENST00000487670 USMG5Q96IX5 58 aa12.04□□□□□ -0.48
TOM1-214ENST00000487670 Q96M66 194 aa12.04□□□□□ -0.48
TOM1-214ENST00000487670 TSNAXQ99598 290 aaKnown RBP12.04□□□□□ -0.48
TOM1-214ENST00000487670 FBXL17Q9UF56 701 aa12.04□□□□□ -0.48
TOM1-214ENST00000487670 ENOPH1Q9UHY7 261 aa12.04□□□□□ -0.48
TOM1-214ENST00000487670 TP53TG1Q9Y2A0 90 aa12.04□□□□□ -0.48
TOM1-214ENST00000487670 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.03□□□□□ -0.48
TOM1-214ENST00000487670 TMEM213A2RRL7 107 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 OR2C1O95371 312 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 IGHV3-23P01764 117 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 MGMTP16455 207 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 ATF4P18848 351 aaPredicted RBP12.03□□□□□ -0.48
TOM1-214ENST00000487670 LGALS7P47929 136 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 Q6ZWC4 215 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 SYS1Q8N2H4 156 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 FBLIM1Q8WUP2 373 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 RNF183Q96D59 192 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 RNF5Q99942 180 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 C9orf16Q9BUW7 83 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 C11orf54Q9H0W9 315 aaPredicted RBP12.03□□□□□ -0.48
TOM1-214ENST00000487670 PAK1IP1Q9NWT1 392 aaPredicted RBP12.03□□□□□ -0.48
TOM1-214ENST00000487670 ERVK13-1Q9NX77 482 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 S4R3C0 116 aa12.03□□□□□ -0.48
TOM1-214ENST00000487670 SRRM4A7MD48 611 aaKnown RBP12.02□□□□□ -0.49
TOM1-214ENST00000487670 RTL8CO15255 209 aa12.02□□□□□ -0.49
TOM1-214ENST00000487670 ZNF780AO75290 641 aaPredicted RBP12.02□□□□□ -0.49
TOM1-214ENST00000487670 FUT3P21217 361 aa12.02□□□□□ -0.49
TOM1-214ENST00000487670 CBLN1P23435 193 aa12.02□□□□□ -0.49
TOM1-214ENST00000487670 PPP3R1P63098 170 aa12.02□□□□□ -0.49
TOM1-214ENST00000487670 BTNL8Q6UX41 500 aa12.02□□□□□ -0.49
TOM1-214ENST00000487670 ZNF554Q86TJ5 538 aa12.02□□□□□ -0.49
TOM1-214ENST00000487670 AMBNQ9NP70 447 aa12.02□□□□□ -0.49
TOM1-214ENST00000487670 TECRQ9NZ01 308 aaKnown RBP12.02□□□□□ -0.49
TOM1-214ENST00000487670 APLNQ9ULZ1 77 aa12.02□□□□□ -0.49
TOM1-214ENST00000487670 GMPPBQ9Y5P6 360 aa12.02□□□□□ -0.49
TOM1-214ENST00000487670 PDCD6O75340 191 aa12.01□□□□□ -0.49
TOM1-214ENST00000487670 CA11O75493 328 aa12.01□□□□□ -0.49
TOM1-214ENST00000487670 GPX5O75715 221 aa12.01□□□□□ -0.49
TOM1-214ENST00000487670 RPL35AP18077 110 aaKnown RBP12.01□□□□□ -0.49
TOM1-214ENST00000487670 ZNF57Q68EA5 555 aaPredicted RBP12.01□□□□□ -0.49
TOM1-214ENST00000487670 SVOPQ8N4V2 548 aa12.01□□□□□ -0.49
TOM1-214ENST00000487670 GPR148Q8TDV2 347 aa12.01□□□□□ -0.49
TOM1-214ENST00000487670 C5orf30Q96GV9 206 aa12.01□□□□□ -0.49
TOM1-214ENST00000487670 PHB2Q99623 299 aa12.01□□□□□ -0.49
TOM1-214ENST00000487670 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
TOM1-214ENST00000487670 STEAP1Q9UHE8 339 aa12.01□□□□□ -0.49
TOM1-214ENST00000487670 TRBV9A0A0B4J1U6 114 aa12□□□□□ -0.49
TOM1-214ENST00000487670 CRTAPO75718 401 aaPredicted RBP12□□□□□ -0.49
TOM1-214ENST00000487670 OR2J3O76001 311 aa12□□□□□ -0.49
TOM1-214ENST00000487670 OR9G9P0C7N8 305 aa12□□□□□ -0.49
TOM1-214ENST00000487670 AWAT2Q6E213 333 aa12□□□□□ -0.49
TOM1-214ENST00000487670 IDO2Q6ZQW0 420 aa12□□□□□ -0.49
TOM1-214ENST00000487670 LINC00336Q6ZUF6 198 aa12□□□□□ -0.49
TOM1-214ENST00000487670 PDPNQ86YL7 162 aa12□□□□□ -0.49
TOM1-214ENST00000487670 HDHD3Q9BSH5 251 aaPredicted RBP12□□□□□ -0.49
TOM1-214ENST00000487670 FAAP24Q9BTP7 215 aa12□□□□□ -0.49
TOM1-214ENST00000487670 KCNK15Q9H427 330 aa12□□□□□ -0.49
TOM1-214ENST00000487670 SLC35D1Q9NTN3 355 aa12□□□□□ -0.49
TOM1-214ENST00000487670 IMPAD1Q9NX62 359 aa12□□□□□ -0.49
TOM1-214ENST00000487670 ORC6Q9Y5N6 252 aa12□□□□□ -0.49
TOM1-214ENST00000487670 A0A1W2PPK0 400 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 DEFB4AO15263 64 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 LALBAP00709 142 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 CD2P06729 351 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 GBX2P52951 348 aaPredicted RBP11.99□□□□□ -0.49
TOM1-214ENST00000487670 ATP5G2Q06055 141 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 C10orf55Q5SWW7 151 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 ZNF880Q6PDB4 577 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 C6orf201Q7Z4U5 140 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 JAGN1Q8N5M9 183 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 UXS1Q8NBZ7 420 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 CCDC140Q96MF4 163 aa11.99□□□□□ -0.49
TOM1-214ENST00000487670 LIMS3P0CW19 117 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 LIMS4P0CW20 117 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 GABRB1P18505 474 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 APOC4P55056 127 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 SNRPGP62308 76 aaKnown RBP11.98□□□□□ -0.49
TOM1-214ENST00000487670 TAGLNQ01995 201 aaKnown RBP11.98□□□□□ -0.49
TOM1-214ENST00000487670 ODF3L2Q3SX64 289 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 OR10K2Q6IF99 312 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 GVQW1Q8N7I0 195 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 OR52I1Q8NGK6 324 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 SETD6Q8TBK2 473 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 SRSF12Q8WXF0 261 aaKnown RBP11.98□□□□□ -0.49
TOM1-214ENST00000487670 HARBI1Q96MB7 349 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 AGRNO00468 2067 aa11.98□□□□□ -0.49
TOM1-214ENST00000487670 FAM90A7PA6NKC0 464 aa11.97□□□□□ -0.49
TOM1-214ENST00000487670 FAM223BA6NKX1 122 aa11.97□□□□□ -0.49
TOM1-214ENST00000487670 M0R1X1 148 aa11.97□□□□□ -0.49
TOM1-214ENST00000487670 LGALS9O00182 355 aa11.97□□□□□ -0.49
TOM1-214ENST00000487670 CASQ2O14958 399 aaPredicted RBP11.97□□□□□ -0.49
TOM1-214ENST00000487670 NAPSAO96009 420 aa11.97□□□□□ -0.49
TOM1-214ENST00000487670 RPS11P62280 158 aaKnown RBP eCLIP11.97□□□□□ -0.49
TOM1-214ENST00000487670 GPR176Q14439 515 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms