RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TMEM59Q9BXS4 323 aa14.76□□□□□ -0.05
SMPDL3A-202ENST00000487215 PLEKHA3Q9HB20 300 aa14.76□□□□□ -0.05
SMPDL3A-202ENST00000487215 PEF1Q9UBV8 284 aaKnown RBP14.76□□□□□ -0.05
SMPDL3A-202ENST00000487215 SHISA3A0PJX4 238 aa14.75□□□□□ -0.05
SMPDL3A-202ENST00000487215 CNIH1O95406 144 aa14.75□□□□□ -0.05
SMPDL3A-202ENST00000487215 ACSM3Q53FZ2 586 aa14.75□□□□□ -0.05
SMPDL3A-202ENST00000487215 ZNF343Q6P1L6 599 aa14.75□□□□□ -0.05
SMPDL3A-202ENST00000487215 KCNG3Q8TAE7 436 aa14.75□□□□□ -0.05
SMPDL3A-202ENST00000487215 TM2D1Q9BX74 207 aa14.75□□□□□ -0.05
SMPDL3A-202ENST00000487215 TINAGL1Q9GZM7 467 aaPredicted RBP14.75□□□□□ -0.05
SMPDL3A-202ENST00000487215 KCNK15Q9H427 330 aa14.75□□□□□ -0.05
SMPDL3A-202ENST00000487215 FKBP14Q9NWM8 211 aa14.75□□□□□ -0.05
SMPDL3A-202ENST00000487215 TNCP24821 2201 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 BRI3O95415 125 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 APOA2P02652 100 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 AADACP22760 399 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 ZBTB25P24278 435 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 MECP2P51608 486 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 HLA-DRB3P79483 266 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 PJVKQ0ZLH3 352 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 UNC119Q13432 240 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 DYRK1AQ13627 763 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 TATDN3Q17R31 274 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 OGFRL1Q5TC84 451 aaPredicted RBP14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 LAIR2Q6ISS4 152 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 BVESQ8NE79 360 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 PTX4Q96A99 478 aa14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 HDHD3Q9BSH5 251 aaPredicted RBP14.74□□□□□ -0.05
SMPDL3A-202ENST00000487215 TRBV6-6A0A0A6YYG2 114 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 CASQ2O14958 399 aaPredicted RBP14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 IGLV2-23P01705 113 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 RANBP1P43487 201 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 CD81P60033 236 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 RPEL1Q2QD12 228 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 RBM48Q5RL73 367 aaKnown RBP14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 C1orf100Q5SVJ3 147 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 TMEM68Q96MH6 324 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 KRTAP17-1Q9BYP8 105 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 RIMS4Q9H426 269 aaPredicted RBP14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 SCN3BQ9NY72 215 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 ZNF221Q9UK13 617 aa14.73□□□□□ -0.05
SMPDL3A-202ENST00000487215 A0A0A6YYD4 124 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 OR2A4O95047 310 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 BPNT1O95861 308 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 CDK1P06493 297 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 CRYGBP07316 175 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 SCTP09683 121 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 SRMP19623 302 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 INSL4Q14641 139 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 HSD17B12Q53GQ0 312 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 LRRTM1Q86UE6 522 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 OR2K2Q8NGT1 345 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 USMG5Q96IX5 58 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 NEURL2Q9BR09 285 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 SLC35D1Q9NTN3 355 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 PLEKHJ1Q9NW61 149 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 AK3Q9UIJ7 227 aa14.72□□□□□ -0.05
SMPDL3A-202ENST00000487215 TMEM14DPA8MWL7 114 aa14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 M0R1X1 148 aa14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 RBMXL2O75526 392 aaKnown RBP14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 TPPPO94811 219 aa14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 LGALS7P47929 136 aa14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 QRFPP83859 136 aa14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 SPHARQ15513 63 aa14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 CEACAM19Q7Z692 300 aa14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 COA4Q9NYJ1 87 aa14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 MGAT4AQ9UM21 535 aa14.71□□□□□ -0.05
SMPDL3A-202ENST00000487215 RBMY1BA6NDE4 496 aaKnown RBP14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 RBMY1EA6NEQ0 496 aaKnown RBP14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 PTGES3LE9PB15 166 aa14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 CD7P09564 240 aa14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 RBMY1DP0C7P1 496 aaKnown RBP14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 LAX1Q8IWV1 398 aa14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 DEFB125Q8N687 156 aa14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 OR6M1Q8NGM8 313 aa14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 URM1Q9BTM9 101 aaKnown RBP14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 WFDC10AQ9H1F0 79 aa14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 Q9N2K0 584 aa14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 PEMTQ9UBM1 199 aa14.7□□□□□ -0.06
SMPDL3A-202ENST00000487215 IGKV1-6A0A0C4DH72 117 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 SOCS1O15524 211 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 APELAP0DMC3 54 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 MED22Q15528 200 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 CD300EQ496F6 205 aaPredicted RBP14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 UFD1Q92890 307 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 SNAPC3Q92966 411 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 HARBI1Q96MB7 349 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 LPAR5Q9H1C0 372 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 SLC2A8Q9NY64 477 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 RDH8Q9NYR8 311 aa14.69□□□□□ -0.06
SMPDL3A-202ENST00000487215 A0A0B4J203 849 aa14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 ZNF785A8K8V0 405 aa14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 BMPR1BO00238 502 aa14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 AIREO43918 545 aa14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 CD37P11049 281 aa14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 TRAM1Q15629 374 aa14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 MRGPRG-AS1Q2M3A8 158 aa14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 ADAD2Q8NCV1 583 aaKnown RBP14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 PHB2Q99623 299 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms