RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 KCNE4Q8WWG9 221 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 APOBEC3DQ96AK3 386 aaPredicted RBP8.97□□□□□ -0.97
CCDC171-208ENST00000486641 CCDC74BQ96LY2 380 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 IGHV2OR16-5A0A0B4J2B6 119 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 A0A1W2PS18 150 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A26D6RGX4 464 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 ZNHIT1O43257 154 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF253O75346 499 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 TIAF1O95411 115 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 SERPINA7P05543 415 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 FKBP2P26885 142 aaKnown RBP8.97□□□□□ -0.97
CCDC171-208ENST00000486641 TSPOP30536 169 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 AMTP48728 403 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 LGALS4P56470 323 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 PSG7Q13046 419 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 MAJINQ3KP22 176 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 MORN2Q502X0 79 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 FBLN7Q53RD9 439 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 SAXO1Q8IYX7 474 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 OR10P1Q8NGE3 313 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 CFHR5Q9BXR6 569 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 TMEM38BQ9NVV0 291 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 DIDO1Q9BTC0 2240 aaKnown RBP8.96□□□□□ -0.97
CCDC171-208ENST00000486641 IGHV2-70DA0A0C4DH43 119 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 SCO2A0A1W2PP80 73 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 A8MXE2 369 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 K7EN84 100 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 M0QZ24 198 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 VAMP5O95183 116 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 IGHEP01854 428 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 PMCHP20382 165 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF83P51522 516 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 CCR5P51681 352 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 WDR74Q6RFH5 385 aaPredicted RBP8.96□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF784Q8NCA9 323 aaPredicted RBP8.96□□□□□ -0.97
CCDC171-208ENST00000486641 OR4C5Q8NGB2 326 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 RCHY1Q96PM5 261 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 OR2H1Q9GZK4 316 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 BET1LQ9NYM9 111 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 HSPB7Q9UBY9 170 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 KCNS2Q9ULS6 477 aa8.96□□□□□ -0.97
CCDC171-208ENST00000486641 RBM7Q9Y580 266 aaKnown RBP8.96□□□□□ -0.97
CCDC171-208ENST00000486641 TRAV9-1A0A075B6T8 112 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 A0A1W2PN81 502 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 LRP5LA4QPB2 252 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 DPRXA6NFQ7 191 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-208ENST00000486641 SIRPB1O00241 398 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 WDR1O75083 606 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 C3orf79P0CE67 100 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 SPINK2P20155 84 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 CARD18P57730 90 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 C17orf82Q86X59 251 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-208ENST00000486641 ATOH7Q8N100 152 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 Q8N7P7 452 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 OR2D3Q8NGH3 330 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 UBALD1Q8TB05 177 aa8.96□□□□□ -0.98
CCDC171-208ENST00000486641 LIN7CQ9NUP9 197 aaKnown RBP8.96□□□□□ -0.98
CCDC171-208ENST00000486641 MRPS16Q9Y3D3 137 aaKnown RBP8.96□□□□□ -0.98
CCDC171-208ENST00000486641 UNC13CQ8NB66 2214 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 TRAV24A0A0B4J272 114 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 CBY3A6NI87 242 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 C17orf112F2Z3M2 114 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 TRAPPC2LH3BP13 241 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 SYNGR1O43759 233 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 GDF9O60383 454 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 ZG16O60844 167 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 PRRX1P54821 245 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 KIAA1644Q3SXP7 199 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 C7orf61Q8IZ16 206 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 KLHDC1Q8N7A1 406 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 ST6GALNAC3Q8NDV1 305 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 MRGPRDQ8TDS7 321 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 ZDHHC16Q969W1 377 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 LOXL4Q96JB6 756 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 ZNF488Q96MN9 340 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 CFAP54Q96N23 3096 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 ASXL3Q9C0F0 2248 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 FGF21Q9NSA1 209 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 SLC35D1Q9NTN3 355 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 ABCA7Q8IZY2 2146 aa8.95□□□□□ -0.98
CCDC171-208ENST00000486641 TRBV6-6A0A0A6YYG2 114 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 A0A1W2PPC4 97 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 ZFAND5O76080 213 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 PPBPP02775 128 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 G6PCP35575 357 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 GFRA1P56159 465 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 MRPS21P82921 87 aaKnown RBP8.94□□□□□ -0.98
CCDC171-208ENST00000486641 VWC2Q2TAL6 325 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 TMEM240Q5SV17 173 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 NIT1Q86X76 327 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 MKXQ8IYA7 352 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 DEFB119Q8N690 84 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 TCTEX1D1Q8N7M0 179 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 OR56B2PQ8NGI1 322 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 SPSB4Q96A44 273 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 SPACA9Q96E40 222 aaPredicted RBP8.94□□□□□ -0.98
CCDC171-208ENST00000486641 GMPPAQ96IJ6 420 aaPredicted RBP8.94□□□□□ -0.98
CCDC171-208ENST00000486641 KCNS1Q96KK3 526 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 UHRF2Q96PU4 802 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms