RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ANGP03950 147 aaKnown RBP1.18□□□□□ -2.22
LTN1-206ENST00000486427 CD24P25063 80 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 PSMB6P28072 239 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 CLDN12P56749 244 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 LGALS9BQ3B8N2 356 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 Q6ZTI0 123 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 C1orf174Q8IYL3 243 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 OR10D3Q8NH80 312 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 Q8WTZ3 238 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 SLC35G5Q96KT7 338 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 CHMP4BQ9H444 224 aaKnown RBP1.18□□□□□ -2.22
LTN1-206ENST00000486427 WDR54Q9H977 334 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 SPACA1Q9HBV2 294 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 SLC2A9Q9NRM0 540 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 EMC3Q9P0I2 261 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 CD300AQ9UGN4 299 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 A0A1W2PP64 1363 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 DSCAMO60469 2012 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 RAD50Q92878 1312 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 ZNF532Q9HCE3 1301 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 J3QQQ9 107 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 M0R381 172 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 ATP6V1G2O95670 118 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 CXCL2P19875 107 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 RBM11P57052 281 aaKnown RBP1.17□□□□□ -2.22
LTN1-206ENST00000486427 RPL26P61254 145 aaKnown RBP1.17□□□□□ -2.22
LTN1-206ENST00000486427 HPCAP84074 193 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 DNAL1Q4LDG9 190 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 PABPC1L2AQ5JQF8 200 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 SPATA12Q7Z6I5 190 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 LHFPL1Q86WI0 220 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 OR7G1Q8NGA0 311 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 RPS4Y2Q8TD47 263 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 SLC37A2Q8TED4 501 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 SMCR5Q8TEV8 140 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 RNASE6Q93091 150 aaKnown RBP1.17□□□□□ -2.22
LTN1-206ENST00000486427 MS4A6EQ96DS6 147 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 SLC22A4Q9H015 551 aa1.17□□□□□ -2.22
LTN1-206ENST00000486427 RPL26L1Q9UNX3 145 aaKnown RBP1.17□□□□□ -2.22
LTN1-206ENST00000486427 NYNRINQ9P2P1 1898 aaKnown RBP1.16□□□□□ -2.22
LTN1-206ENST00000486427 TRGV5A0A0B4J1U4 118 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 A0A1W2PQD3 144 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 CXCL3P19876 107 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 RPL14P50914 215 aaKnown RBP1.16□□□□□ -2.22
LTN1-206ENST00000486427 TAS2R30P59541 319 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 BTN3A2P78410 334 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 FABP5Q01469 135 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 UAP1Q16222 522 aaPredicted RBP1.16□□□□□ -2.22
LTN1-206ENST00000486427 DNM1P34Q6PK57 102 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 DRAM2Q6UX65 266 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 FAM19A5Q7Z5A7 132 aaPredicted RBP1.16□□□□□ -2.22
LTN1-206ENST00000486427 CD302Q8IX05 232 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 BAP18Q8IXM2 172 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 LRRC34Q8IZ02 419 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 DAND5Q8N907 189 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 LHFPL5Q8TAF8 219 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 CYGBQ8WWM9 190 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 NDEL1Q9GZM8 345 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 HDGFL3Q9Y3E1 203 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 GMEB1Q9Y692 573 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 SCN9AQ15858 1988 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 CHD5Q8TDI0 1954 aa1.16□□□□□ -2.22
LTN1-206ENST00000486427 DISP1Q96F81 1524 aa1.15□□□□□ -2.22
LTN1-206ENST00000486427 WDR90Q96KV7 1748 aa1.15□□□□□ -2.22
LTN1-206ENST00000486427 TMSB15BA0A087X1C1 80 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 TEX50A0A1B0GTY4 177 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 A0A1B0GVG6 124 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 GOLGA6L10A6NI86 522 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 ZNF705FA8MVS1 300 aaPredicted RBP1.15□□□□□ -2.23
LTN1-206ENST00000486427 UBE2L6O14933 153 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 STX10O60499 249 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 MT-CO2P00403 227 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 PET100P0DJ07 73 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 LYNX1P0DP58 116 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 CD79BP40259 229 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 RAP1GDS1P52306 607 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 GNA13Q14344 377 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 EBPQ15125 230 aaKnown RBP1.15□□□□□ -2.23
LTN1-206ENST00000486427 HSP90B2PQ58FF3 399 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 SDHAF4Q5VUM1 108 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 OR5J2Q8NH18 312 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 ASB13Q8WXK3 278 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 ATP6V1G3Q96LB4 118 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 NSRP1Q9H0G5 558 aaKnown RBP1.15□□□□□ -2.23
LTN1-206ENST00000486427 MS4A6AQ9H2W1 248 aa1.15□□□□□ -2.23
LTN1-206ENST00000486427 PCYT1BQ9Y5K3 369 aaPredicted RBP1.15□□□□□ -2.23
LTN1-206ENST00000486427 A0A087WUU8 490 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 TRAV41A0A0B4J266 112 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 TINCRA0A1B0GVN0 87 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 OR6C6A6NF89 314 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 BHLHE40O14503 412 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 NPYP01303 97 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 GPX1P07203 203 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 UCHL1P09936 223 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 HIST1H1CP16403 213 aaKnown RBP1.14□□□□□ -2.23
LTN1-206ENST00000486427 IDH3GP51553 393 aaPredicted RBP1.14□□□□□ -2.23
LTN1-206ENST00000486427 TMEM33P57088 247 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 RPS24P62847 133 aaKnown RBP1.14□□□□□ -2.23
LTN1-206ENST00000486427 ERHP84090 104 aaKnown RBP1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms