RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 YEATS4O95619 227 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 IGHV1-69P01742 117 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 UGT2B7P16662 529 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 ALOX5APP20292 161 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 IFNGR2P38484 337 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 CD79BP40259 229 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 CDK9P50750 372 aaKnown RBP1□□□□□ -2.25
GCFC2-209ENST00000486016 FABP5Q01469 135 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 GNA13Q14344 377 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 CHCHD2P9Q5T1J5 151 aaPredicted RBP1□□□□□ -2.25
GCFC2-209ENST00000486016 GLT6D1Q7Z4J2 308 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 BAP18Q8IXM2 172 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 LRRC34Q8IZ02 419 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 CNEP1R1Q8N9A8 125 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 ASB13Q8WXK3 278 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 FGF13Q92913 245 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 SMIM19Q96E16 107 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 CPNE2Q96FN4 548 aaPredicted RBP1□□□□□ -2.25
GCFC2-209ENST00000486016 Q9BRP9 147 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 TIPINQ9BVW5 301 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 PLEKHJ1Q9NW61 149 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 EMC3Q9P0I2 261 aa1□□□□□ -2.25
GCFC2-209ENST00000486016 PCYT1BQ9Y5K3 369 aaPredicted RBP1□□□□□ -2.25
GCFC2-209ENST00000486016 PLXNA3P51805 1871 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 C1orf232A0A0U1RR37 186 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 GOLGA8KD6RF30 607 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 F5H768 121 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 GOLGA8MH3BSY2 632 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 UBE2L6O14933 153 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 CETN3O15182 167 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 IL6P05231 212 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 XCL1P47992 114 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 TMEM33P57088 247 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 BTN3A2P78410 334 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 MGAT3Q09327 533 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 EBPQ15125 230 aaKnown RBP0.99□□□□□ -2.25
GCFC2-209ENST00000486016 AGTRAPQ6RW13 159 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 SLC35F6Q8N357 371 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 TMEM251Q8N6I4 163 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 ZNF283Q8N7M2 679 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 DAND5Q8N907 189 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 OR4X1Q8NH49 305 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 RPS4Y2Q8TD47 263 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 MS4A6EQ96DS6 147 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 PACRGQ96M98 296 aaPredicted RBP0.99□□□□□ -2.25
GCFC2-209ENST00000486016 KCTD7Q96MP8 289 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 DHRS9Q9BPW9 319 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 MIEN1Q9BRT3 115 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 LLPHQ9BRT6 129 aaKnown RBP0.99□□□□□ -2.25
GCFC2-209ENST00000486016 DERL2Q9GZP9 239 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 SPANXB1Q9NS25 103 aaPredicted RBP0.99□□□□□ -2.25
GCFC2-209ENST00000486016 THSD7AQ9UPZ6 1657 aa0.99□□□□□ -2.25
GCFC2-209ENST00000486016 ATG2BQ96BY7 2078 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 TMED7-TICAM2A0A0A6YYA0 188 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 NDUFB2O95178 105 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 MT-CO2P00403 227 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 ZNF728P0DKX0 622 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 HINT1P49773 126 aaPredicted RBP0.98□□□□□ -2.25
GCFC2-209ENST00000486016 TAS2R30P59541 319 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 CXCR4P61073 352 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 RPS24P62847 133 aaKnown RBP0.98□□□□□ -2.25
GCFC2-209ENST00000486016 HLA-DRB3P79483 266 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 JOSD1Q15040 202 aaPredicted RBP0.98□□□□□ -2.25
GCFC2-209ENST00000486016 TPRXLQ17RH7 258 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 LGALS9BQ3B8N2 356 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 SPATA12Q7Z6I5 190 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 NAA40Q86UY6 237 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 FAM9CQ8IZT9 166 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 PACRGLQ8N7B6 248 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 OR4X2Q8NGF9 303 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 CLDND2Q8NHS1 167 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 DCANP1Q8TF63 244 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 EEF1AKMT1Q8WVE0 214 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 RNASE6Q93091 150 aaKnown RBP0.98□□□□□ -2.25
GCFC2-209ENST00000486016 CMTM5Q96DZ9 223 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 MRPS24Q96EL2 167 aaKnown RBP0.98□□□□□ -2.25
GCFC2-209ENST00000486016 SLC35G5Q96KT7 338 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 TMEM109Q9BVC6 243 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 NDUFB11Q9NX14 153 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 PRO2289Q9P1D8 64 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 FAM215AQ9Y5M1 114 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 STRCP1A6NGW2 1772 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 PXDNLA1KZ92 1463 aa0.98□□□□□ -2.25
GCFC2-209ENST00000486016 ARHGAP32A7KAX9 2087 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 MPDZO75970 2070 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 IGLV3-9A0A075B6K5 115 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 A0A1W2PQD3 144 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 C5orf49A4QMS7 147 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 ARRDC5A6NEK1 342 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 OR6C6A6NF89 314 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 ZNF860A6NHJ4 632 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 C2orf74A8MZ97 194 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 HLA-DRAP01903 254 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 HLA-DQB2P05538 268 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 CD24P25063 80 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 PEBP1P30086 187 aaKnown RBP0.97□□□□□ -2.25
GCFC2-209ENST00000486016 EMP2P54851 167 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 CTBP2P56545 445 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 RBM11P57052 281 aaKnown RBP0.97□□□□□ -2.25
GCFC2-209ENST00000486016 MAP3K7CLP57077 242 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms