RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 TLNRD1Q9H1K6 362 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 ARV1Q9H2C2 271 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 LIME1Q9H400 295 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 SMDT1Q9H4I9 107 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 NARFLQ9H6Q4 476 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 DLL3Q9NYJ7 618 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 TAAR3PQ9P1P4 343 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 WIPI2Q9Y4P8 454 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 LSM5Q9Y4Y9 91 aaKnown RBP6.45□□□□□ -1.38
SNX13-208ENST00000482558 ARHGAP21Q5T5U3 1957 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 VCANP13611 3396 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 DNAJC13O75165 2243 aa6.45□□□□□ -1.38
SNX13-208ENST00000482558 MED13Q9UHV7 2174 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 TRAV24A0A0B4J272 114 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 SPAARA0A1B0GVQ0 90 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 TMEM30CPA0ZSE6 113 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 MPTX1A8MV57 137 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 ZNF705EA8MWA4 302 aaPredicted RBP6.44□□□□□ -1.38
SNX13-208ENST00000482558 UMAD1C9J7I0 102 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.44□□□□□ -1.38
SNX13-208ENST00000482558 SAP30O75446 220 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 NXPH2O95156 264 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 NXPH3O95157 252 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 IGLV1-44P01699 117 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 SERPINE2P07093 398 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 FAM157CP0CG43 387 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 HNF1AP20823 631 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 F2RP25116 425 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 IDH3GP51553 393 aaPredicted RBP6.44□□□□□ -1.38
SNX13-208ENST00000482558 CAV2P51636 162 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 DAZAP2Q15038 168 aaPredicted RBP6.44□□□□□ -1.38
SNX13-208ENST00000482558 ATP1A1-AS1Q5TC04 95 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 SLC35E4Q6ICL7 350 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 Q6P435 159 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 ZNF497Q6ZNH5 498 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 LYZL2Q7Z4W2 148 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 SELENOHQ8IZQ5 122 aaKnown RBP6.44□□□□□ -1.38
SNX13-208ENST00000482558 SLC35G3Q8N808 338 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 CNEP1R1Q8N9A8 125 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 SCCPDHQ8NBX0 429 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 LFNGQ8NES3 379 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 OR10V1Q8NGI7 309 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 OR10Z1Q8NGY1 313 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 SLC25A40Q8TBP6 338 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 SECTM1Q8WVN6 248 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 PCNPQ8WW12 178 aaKnown RBP6.44□□□□□ -1.38
SNX13-208ENST00000482558 TMED6Q8WW62 240 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 LINC00052Q96N35 136 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 GINS3Q9BRX5 216 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 OR2J1Q9GZK6 312 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 FGF23Q9GZV9 251 aaPredicted RBP6.44□□□□□ -1.38
SNX13-208ENST00000482558 TOLLIPQ9H0E2 274 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 PLEKHF2Q9H8W4 249 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 HES4Q9HCC6 221 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 ASF1BQ9NVP2 202 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 ONECUT1Q9UBC0 465 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 CACFD1Q9UGQ2 172 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 PURGQ9UJV8 347 aaKnown RBP6.44□□□□□ -1.38
SNX13-208ENST00000482558 ZNF407Q9C0G0 2248 aa6.44□□□□□ -1.38
SNX13-208ENST00000482558 TMEM218A2RU14 115 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 CXorf65A6NEN9 183 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 MSGN1A6NI15 193 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 OR5H1A6NKK0 313 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 FAM90A26D6RGX4 464 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 PGLYRP1O75594 196 aaPredicted RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 DFFBO76075 338 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 SNAPINO95295 136 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 OR2H2O95918 312 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 IGHV2-70P01814 119 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 ELANEP08246 267 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 SCTP09683 121 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 TIMP3P35625 211 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 NBL1P41271 181 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 RPS23P62266 143 aaKnown RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 PSG7Q13046 419 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 IGFBP7Q16270 282 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 DEFB109BQ30KR1 87 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 SMIM21Q3B7S5 101 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 SP6Q3SY56 376 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 FAM74A1Q5RGS3 127 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 C10orf91Q5T1B1 145 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 ZNF324BQ6AW86 544 aaPredicted RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 RPL7L1Q6DKI1 246 aaKnown RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 PCSK4Q6UW60 755 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 DPPA3Q6W0C5 159 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 ZNF818PQ6ZRF7 136 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 BHLHA15Q7RTS1 189 aaPredicted RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 OR1S2Q8NGQ3 325 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 LYPD6BQ8NI32 183 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 KLF14Q8TD94 323 aaPredicted RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 DYRK2Q92630 601 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 GNPNAT1Q96EK6 184 aaPredicted RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 TP53RKQ96S44 253 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 SEC11CQ9BY50 192 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 TREM1Q9NP99 234 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 OR2S2Q9NQN1 319 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 LYRM2Q9NU23 88 aaPredicted RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 ZNF629Q9UEG4 869 aaPredicted RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 TRAPPC2LQ9UL33 140 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 LAMP3Q9UQV4 416 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms