RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 AMBPP02760 352 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 SOD3P08294 240 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 HIST1H1BP16401 226 aaKnown RBP3.12□□□□□ -1.91
VPS41-212ENST00000482217 RAB3BP20337 219 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 NCBP2P52298 156 aaKnown RBP eCLIP3.12□□□□□ -1.91
VPS41-212ENST00000482217 ZNF138P52744 262 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 DAD1P61803 113 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 HBA1P69905 142 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 FABP5Q01469 135 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 C16orf72Q14CZ0 275 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 KIAA0040Q15053 153 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 EBPQ15125 230 aaKnown RBP3.12□□□□□ -1.91
VPS41-212ENST00000482217 BATFQ16520 125 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 C17orf58Q2M2W7 97 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 ZFP69Q49AA0 526 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 FAM53AQ6NSI3 398 aaPredicted RBP3.12□□□□□ -1.91
VPS41-212ENST00000482217 WDR59Q6PJI9 974 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 ZNF493Q6ZR52 646 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 TCF23Q7RTU1 214 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 C11orf42Q8N5U0 333 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 ACBD7Q8N6N7 88 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 TMEM75Q8N9X5 138 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 OR11H7Q8NGC8 314 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 FLVCR1-AS1Q8TAF5 88 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 ZNF420Q8TAQ5 688 aaPredicted RBP3.12□□□□□ -1.91
VPS41-212ENST00000482217 TMEM190Q8WZ59 177 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 GPR146Q96CH1 333 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 ZNF501Q96CX3 271 aaPredicted RBP3.12□□□□□ -1.91
VPS41-212ENST00000482217 NEURL3Q96EH8 262 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 ERMAPQ96PL5 475 aaPredicted RBP3.12□□□□□ -1.91
VPS41-212ENST00000482217 SIGLEC12Q96PQ1 595 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 GABARAPL3Q9BY60 117 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 SELENOIQ9C0D9 397 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 ZNF436Q9C0F3 470 aaPredicted RBP3.12□□□□□ -1.91
VPS41-212ENST00000482217 OR8D2Q9GZM6 311 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 PARP11Q9NR21 331 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 KCNIP2Q9NS61 270 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 TBX21Q9UL17 535 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 ANAPC10Q9UM13 185 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 KLF13Q9Y2Y9 288 aaPredicted RBP3.12□□□□□ -1.91
VPS41-212ENST00000482217 MED31Q9Y3C7 131 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 KIAA1551Q9HCM1 1747 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 NFASCO94856 1347 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 RTL1A6NKG5 1358 aa3.12□□□□□ -1.91
VPS41-212ENST00000482217 A0A0B4J2A0 478 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 TRGV8A0A0C4DH27 118 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 PGPA6NDG6 321 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 A8MWP6 167 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 C4orf51C9J302 202 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 AGPAT2O15120 278 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 TNFSF13O75888 250 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 IGKV3-20P01619 116 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 FABP3P05413 133 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 PATE4P0C8F1 98 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 SMIM17P0DL12 118 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 CT45A10P0DMU9 189 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 LINC00694P0DN24 101 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 LAMP1P11279 417 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 IGHV1-2P23083 117 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 GADD45AP24522 165 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 PPP1CCP36873 323 aaKnown RBP3.11□□□□□ -1.91
VPS41-212ENST00000482217 POLR2IP36954 125 aaKnown RBP3.11□□□□□ -1.91
VPS41-212ENST00000482217 RAB5CP51148 216 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 CCL23P55773 120 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 LY6DQ14210 128 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 SLC10A1Q14973 349 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 RBMY1FQ15415 496 aaKnown RBP3.11□□□□□ -1.91
VPS41-212ENST00000482217 MMDQ15546 238 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 SP6Q3SY56 376 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 ZNF876PQ49A33 203 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 ABCA11PQ4W5N1 156 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 PABPC1L2AQ5JQF8 200 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 C1orf100Q5SVJ3 147 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 TMEM69Q5SWH9 247 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 GLIPR1L1Q6UWM5 242 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 CXCL17Q6UXB2 119 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 TEX43Q6ZNM6 134 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 Q6ZRP5 223 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 HSD17B13Q7Z5P4 300 aaPredicted RBP3.11□□□□□ -1.91
VPS41-212ENST00000482217 C8orf59Q8N0T1 100 aaPredicted RBP3.11□□□□□ -1.91
VPS41-212ENST00000482217 YIPF7Q8N8F6 280 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 OR5AP2Q8NGF4 316 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 OR2T27Q8NH04 317 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 OR8S1Q8NH09 359 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 SLC25A40Q8TBP6 338 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 VN1R17PQ8TDU5 208 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 RXFP4Q8TDU9 374 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 LMX1AQ8TE12 382 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 GALNT14Q96FL9 552 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 SLC35E1Q96K37 410 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 CNBD2Q96M20 576 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 ATOH8Q96SQ7 321 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 SYT15Q9BQS2 421 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 THTPAQ9BU02 230 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 C19orf24Q9BVV8 132 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 OR2J1Q9GZK6 312 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 GTSF1LQ9H1H1 148 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 IFI27L2Q9H2X8 130 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 VCXQ9H320 206 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 ZNF696Q9H7X3 374 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms