RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	IMP4	Q96G21	291 aa	Known RBP	0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	ANKRD36BP1	Q96IX9	119 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR8B2	Q96RD0	313 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	PAIP2	Q9BPZ3	127 aa	Known RBP	0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM109	Q9BVC6	243 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR2D2	Q9H210	308 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	SLC2A9	Q9NRM0	540 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	TAS2R9	Q9NYW1	312 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	AK3	Q9UIJ7	227 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	HHLA2	Q9UM44	414 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	SNX12	Q9UMY4	172 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173		U3KQK5	164 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	LAMB2	P55268	1798 aa		0.75	□□□□□ -2.29
CCNL1-223	ENST00000481173	NUP153	P49790	1475 aa	Known RBP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	BAZ1B	Q9UIG0	1483 aa	Known RBP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	PTPRK	Q15262	1439 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	RIMS2	Q9UQ26	1411 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	ADCY9	O60503	1353 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	MAP3K5	Q99683	1374 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	CLUH	O75153	1309 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	MYO3B	Q8WXR4	1341 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGKV1OR2-108	A0A075B7D4	117 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGHV3-73	A0A0B4J1V6	119 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGHV1-69-2	A0A0G2JMI3	117 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM235	A6NFC5	223 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173		A8MWP4	228 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173		F5H768	121 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173		G3V3Q6	166 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TGOLN2	O43493	480 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	NDUFB2	O95178	105 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	BRI3	O95415	125 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGLV3-27	P01718	113 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	ATP5G1	P05496	136 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	ESD	P10768	282 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	CD79A	P11912	226 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	CPM	P14384	443 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	NPPC	P23582	126 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	CCR7	P32248	378 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	EVI2B	P34910	448 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	COIL	P38432	576 aa	Predicted RBP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	HAAO	P46952	286 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	NKX2-5	P52952	324 aa	Predicted RBP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	EMP1	P54849	157 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TCL1A	P56279	114 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	CLDN12	P56749	244 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	FXYD7	P58549	80 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TAS2R20	P59543	309 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	CXCR4	P61073	352 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	PSME3	P61289	254 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	AP1S1	P61966	158 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	POLR2G	P62487	172 aa	Known RBP eCLIP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	HERVK_113	P63121	156 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZNF117	Q03924	483 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM267	Q0VDI3	215 aa	Predicted RBP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	STX5	Q13190	355 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	DHRS2	Q13268	280 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMED2	Q15363	201 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	RSU1	Q15404	277 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	IMPG1	Q17R60	797 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	PLPPR5	Q32ZL2	321 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM176B	Q3YBM2	270 aa	Predicted RBP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	COQ5	Q5HYK3	327 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	SPATA31B1P	Q5VZV4	182 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZNF322	Q6U7Q0	402 aa	Predicted RBP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	SCX	Q7RTU7	201 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TRAPPC5	Q8IUR0	188 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	C20orf196	Q8IYI0	205 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TBC1D19	Q8N5T2	526 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	UBL4B	Q8N7F7	174 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM161B	Q8NDZ6	487 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	GPR32P1	Q8NGA4	272 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR11G2	Q8NGC1	345 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZNRF2	Q8NHG8	242 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	FNDC9	Q8TBE3	224 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	CD200R1	Q8TD46	325 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	MAL2	Q969L2	176 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	PTH2	Q96A98	100 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	CHMP6	Q96FZ7	201 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	DCUN1D1	Q96GG9	259 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	DIRAS2	Q96HU8	199 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	BTF3L4	Q96K17	158 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	CCDC42	Q96M95	316 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR52E6	Q96RD3	313 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TSSK6	Q9BXA6	273 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	COMMD5	Q9GZQ3	224 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM222	Q9H0R3	208 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR51V1	Q9H2C8	321 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	SMDT1	Q9H4I9	107 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	HRASLS	Q9HDD0	168 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	VPS29	Q9UBQ0	182 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR5V1	Q9UGF6	321 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	GUCA1B	Q9UMX6	200 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173		V9GYY5	206 aa	Predicted RBP	0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173	SIGLEC1	Q9BZZ2	1709 aa		0.74	□□□□□ -2.29
CCNL1-223	ENST00000481173		A0A1B0GU33	70 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	LOC102725191	A0A1B0GVB3	256 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGSF23	A1L1A6	192 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	C2orf74	A8MZ97	194 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173		H3BPC8	53 aa		0.73	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms