RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 FAM231DQ6ZW35 169 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 LRRC6Q86X45 466 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 KRT222Q8N1A0 295 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 ZFP62Q8NB50 900 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-211ENST00000476215 OR11G2Q8NGC1 345 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 OR51L1Q8NGJ5 315 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 OR8K3Q8NH51 312 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 PSMF1Q92530 271 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 RAD51AP1Q96B01 352 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 SELENOSQ9BQE4 189 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 C20orf144Q9BQM9 153 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 TMED9Q9BVK6 235 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 TSGA10Q9BZW7 698 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 DUSP21Q9H596 190 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 WDR54Q9H977 334 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 ASF1BQ9NVP2 202 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 SLC7A11Q9UPY5 501 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 CCDC88CQ9P219 2028 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 NF1P21359 2839 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 HIVEP1P15822 2718 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 CELSR1Q9NYQ6 3014 aa2.28□□□□□ -2.05
PTCD3-211ENST00000476215 DIDO1Q9BTC0 2240 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 ANKRD17O75179 2603 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 TNRC6AQ8NDV7 1962 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 CCDC168Q8NDH2 2452 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 SPG11Q96JI7 2443 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 CSMD2Q7Z408 3487 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 A0A1B0GX78 115 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 C9JQL5 133 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 GOLGA8KD6RF30 607 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 H0YGG7 62 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 TXNDC9O14530 226 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 PFDN6O15212 129 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 NIPSNAP2O75323 286 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 PSIP1O75475 530 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 DHRS3O75911 302 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 SERPINA7P05543 415 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 SNRPAP09012 282 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 MLNP12872 115 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 LGALS3P17931 250 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 CMPK1P30085 196 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 SLC6A1P30531 599 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 RPA3P35244 121 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 COILP38432 576 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 MAGEA6P43360 314 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 EMP2P54851 167 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 KLF3P57682 345 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 RPL31P62899 125 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 SARNPP82979 210 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 IFFO1Q0D2I5 559 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 TMED2Q15363 201 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 TRIP13Q15645 432 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 PYDC2Q56P42 97 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 MRPL2Q5T653 305 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 ZNF660Q6AZW8 331 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 PRNTQ86SH4 94 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 ZNF321PQ8N8H1 164 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 ST6GALNAC3Q8NDV1 305 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 OR5H2Q8NGV7 314 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 NT5CQ8TCD5 201 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 EEF1AKMT1Q8WVE0 214 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 SKA2Q8WVK7 121 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 MAGOHBQ96A72 148 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 CENPNQ96H22 339 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 SMIM8Q96KF7 97 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 PPP1R36Q96LQ0 422 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 CYTH2Q99418 400 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 EBNA1BP2Q99848 306 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 TMEM38BQ9NVV0 291 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 STMN3Q9NZ72 180 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 C3orf18Q9UK00 162 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 NXT1Q9UKK6 140 aaKnown RBP2.27□□□□□ -2.05
PTCD3-211ENST00000476215 ZNF407Q9C0G0 2248 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 MYO7BQ6PIF6 2116 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 FBN2P35556 2912 aa2.27□□□□□ -2.05
PTCD3-211ENST00000476215 PCNX1Q96RV3 2341 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 DOCK10Q96BY6 2186 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 TRAV17A0A0B4J275 112 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 A0A1W2PPV4 95 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 GOLGA8MH3BSY2 632 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 ALOX12BO75342 701 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 OR2A4O95047 310 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 MPC1LP0DKB6 136 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 COX6A1P12074 109 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 OGNP20774 298 aaKnown RBP2.26□□□□□ -2.05
PTCD3-211ENST00000476215 MAGEA3P43357 314 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 BASP1P80723 227 aaKnown RBP2.26□□□□□ -2.05
PTCD3-211ENST00000476215 IL5RAQ01344 420 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 AMMECR1LQ6DCA0 310 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 ZNF470Q6ECI4 717 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 PAGE2Q7Z2X7 111 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 VN1R4Q7Z5H5 301 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 TMEM144Q7Z5S9 345 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 OTUD6BQ8N6M0 293 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 CCNYL1Q8N7R7 359 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 PLPP5Q8NEB5 264 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 OR51Q1Q8NH59 317 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 PRAP1Q96NZ9 151 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 SPACA5Q96QH8 159 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 OR2A7Q96R45 310 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms